myRT

myRT report for GCA_000792385.1_AZPAE14987

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Seq: JTPH01000013.1 (143301 bp)
Overview 1 RT 1: 6996-10987 bp Neighborhood of RT #1 [6996, 10987] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 6996-7580 bp Feature: domain Description: DUF1566 Location: 7278-7566 bp Feature: domain Description: DUF1 566 Location: 7278-7566 bp Feature: gene Location: 7619-7975 bp Feature: domain Description: Avd_like Location: 7646-7949 bp Feature: domain Description: Avd_like Location: 7646-7949 bp Feature: gene Location: 8248-9387 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8425-9184 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8425-91 84 bp Feature: gene Location: 10027-10221 bp Feature: gene Location: 10613-10987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: JTPH01000040.1 (94879 bp)
Overview 1 RT 1: 71652-82346 bp Neighborhood of RT #1 [71652, 82346] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH INT_Rci_Hp1_C Feature: gene Location: 71652-73505 bp Feature: domain Description: PRK05658 Location: 71664-73503 bp Feature: domain Description: PRK05658 Location: 71664-73503 bp Feature: gene Location: 73612-77349 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73720-74377 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 7372 0-74377 bp Feature: domain Description: PRK09776 Location: 74590-75061 bp Feature: domain Description: PRK09776 Location: 74590-75061 bp Feature: domain Description: PAS Location: 75106-75643 bp Feature: domain Description: PAS Location: 75106-75643 bp Feature: domain Description: PRK10060 Location: 75652-77299 bp Feature: domain Description: PRK10060 Location: 75652 -772 99 bp Feature: gene Location: 78430-80115 bp Feature: RT Description: RVT_N Location: 78487-78727 bp Feature: RT Description: RVT_N Location: 78487-7872 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78775-79411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78775-79411 bp Feature: domain Description: GIIM Note: maturase Location: 79465-79696 bp Feature: domain Description: GIIM Note: maturase Location: 79465-79696 bp Feature: domain Description: HNH Note: nucleases Location: 79948-80086 bp Feature: domain Description: HNH Note: nucleases Location: 79948-80086 bp Feature: gene Location: 80417-81511 bp Feature: domain Description: INT_Rci_Hp1_C Location: 80927-81428 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8092 7-8142 8 bp Feature: gene Location: 81588-82346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), INT_Rci_Hp1_C (cd00796)

Seq: JTPH01000026.1 (225938 bp)
Overview 1 RT 1: 74100-78146 bp Neighborhood of RT #1 [74100, 78175] RVT-GII GIIM DUF3085 Feature: gene Location: 74100-74816 bp Feature: gene Location: 75171-75815 bp Feature: gene Location: 75408-76607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75573-76188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75573 -76188 bp Feature: domain Description: GIIM Note: maturase Location: 76245-76461 bp Feature: domain Description: GIIM Note: maturase Location: 76245-76461 bp Feature: gene Location: 76947-77744 bp Feature: gene Location: 77810-78175 bp Feature: domain Description: DUF3085 Location: 77876-78146 bp Feature: domain Description: DUF3 085 Location: 77876-78146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3085 (pfam11284)