myRT

myRT report for GCA_000792625.1_AZPAE14998

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Seq: JTOW01000073.1 (2991 bp)
Overview 1 RT 1: 75-2072 bp Neighborhood of RT #1 [75, 2072] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 75-1781 bp Feature: domain Description: RVT_N Location: 132-375 bp Feature: domain Description: RVT_N Location: 1 32-375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1 056 bp Feature: domain Description: YkfC Location: 1254-1359 bp Feature: domain Description: YkfC Location: 1 254-1 359 bp Feature: domain Description: HNHc Note: nucleases Location: 1569-1725 bp Feature: domain Description: HNHc Note: nucleases Location: 1 569-1 725 bp Feature: gene Location: 1878-2072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: JTOW01000010.1 (494856 bp)
Overview 1 RT 1: 261-6505 bp Neighborhood of RT #1 [261, 6792] RVT-UG5 nitrilase COG4127 restrict_AAA_1 restrict_AAA_1 Feature: gene Location: 261-2741 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 264-693 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 64-693 bp Feature: domain Description: nitrilase Location: 2055-2637 bp Feature: domain Description: nitrilase Location: 2 055-2 637 bp Feature: gene Location: 3111-3776 bp Feature: domain Description: COG4127 Location: 3114-3765 bp Feature: domain Description: COG412 7 Location: 3114-3765 bp Feature: gene Location: 5041-6792 bp Feature: domain Description: restrict_AAA_1 Location: 5044-5791 bp Feature: domain Description: restrict_AAA_1 Location: 5044-5791 bp Feature: domain Description: restrict_AAA_1 Location: 6118-6505 bp Feature: domain Description: restrict_AAA_1 Location: 6118-6505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), restrict_AAA_1 (TIGR04435)

Seq: JTOW01000094.1 (2418 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963 -1614 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 213 3 -2289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JTOW01000045.1 (105454 bp)
Overview 1 RT 1: 95898-99944 bp Neighborhood of RT #1 [95898, 99973] RVT-GII GIIM DUF3085 Feature: gene Location: 95898-96614 bp Feature: gene Location: 96969-97613 bp Feature: gene Location: 97206-98405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97371-97986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97371-97986 bp Feature: domain Description: GIIM Note: maturase Location: 98043-98259 bp Feature: domain Description: GIIM Note: maturase Location: 9804 3-98259 bp Feature: gene Location: 98745-99542 bp Feature: gene Location: 99608-99973 bp Feature: domain Description: DUF3085 Location: 99674-99944 bp Feature: domain Description: DUF3085 Location: 99674 -9994 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3085 (pfam11284)