myRT

myRT report for GCA_000792805.1_AZPAE15007

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Seq: JTON01000062.1 (35906 bp)
Overview 1 RT 1: 25775-33947 bp Neighborhood of RT #1 [25775, 34141] DUF262 YeeA RVT-UG5 AAA_21 AAA_21 Feature: gene Location: 25775-27646 bp Feature: domain Description: DUF262 Location: 25823-26591 bp Feature: domain Description: DUF262 Location: 25823-26591 bp Feature: gene Location: 27650-29431 bp Feature: domain Description: YeeA Location: 28517-29297 bp Feature: domain Description: YeeA Location: 2851 7-29297 bp Feature: gene Location: 29428-32448 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29923-30394 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29923-30394 bp Feature: gene Location: 32445-33002 bp Feature: gene Location: 33002-34141 bp Feature: domain Description: AAA_21 Location: 33074-33143 bp Feature: domain Description: AAA_21 Location: 33074-331 43 bp Feature: domain Description: AAA_21 Location: 33617-33947 bp Feature: domain Description: AAA_21 Location: 3361 7-33947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), YeeA (COG1002), RVT-UG5, AAA_21 (pfam13304)

Seq: JTON01000059.1 (55209 bp)
Overview 1 RT 1: 34259-38555 bp Neighborhood of RT #1 [34259, 38638] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 34259-34438 bp Feature: gene Location: 34622-35020 bp Feature: gene Location: 35170-36438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35383-36040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35383-36040 bp Feature: domain Description: GIIM Note: maturase Location: 36118-36340 bp Feature: domain Description: GIIM Note: maturase Location: 36118-36340 bp Feature: gene Location: 36827-37468 bp Feature: domain Description: DUF772 Location: 36977-37172 bp Feature: domain Description: DUF772 Location: 36977-37172 bp Feature: gene Location: 37811-38638 bp Feature: domain Description: ABC_phnC Location: 37841-38555 bp Feature: domain Description: ABC_phnC Location: 37841-38555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: JTON01000013.1 (260427 bp)
Overview 1 RT 1: 49294-58135 bp 2 RT 2: 74399-84323 bp Neighborhood of RT #1 [49294, 58143] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74399, 84406] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH int HTH_XRE Feature: gene Location: 49294-49968 bp Feature: domain Description: NTP_transferase_like_1 Location: 49300-49939 bp Feature: domain Description: NTP_transferase_like_1 Location: 493 00-4993 9 bp Feature: gene Location: 49965-50981 bp Feature: domain Description: COG3178 Location: 49968-50967 bp Feature: domain Description: COG3 178 Location: 49968-50967 bp Feature: gene Location: 52254-53966 bp Feature: domain Description: RVT_N Location: 52311-52554 bp Feature: domain Description: RVT_N Location: 523 11-52554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52599-53235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52599-53 23 5 bp Feature: domain Description: YkfC Location: 53445-53595 bp Feature: domain Description: YkfC Location: 53 445-53 595 bp Feature: domain Description: HNH Note: nucleases Location: 53772-53910 bp Feature: domain Description: HNH Note: nucleases Location: 53 772-53 910 bp Feature: gene Location: 54099-56870 bp Feature: domain Description: LptD Location: 54294-56856 bp Feature: domain Description: LptD Location: 54294-56856 bp Feature: gene Location: 56929-58143 bp Feature: domain Description: PRK10770 Location: 56941-58135 bp Feature: domain Description: PRK10770 Location: 56941-5813 5 bp Feature: gene Location: 74399-76252 bp Feature: domain Description: PRK05658 Location: 74411-76250 bp Feature: domain Description: PRK05658 Location: 74411-76250 bp Feature: gene Location: 76359-80096 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76467-77124 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76467-77124 bp Feature: domain Description: PRK09776 Location: 77337-77808 bp Feature: domain Description: PRK09776 Location: 773 3 7-77808 bp Feature: domain Description: PAS Location: 77865-78390 bp Feature: domain Description: PAS Location: 77865-783 90 bp Feature: domain Description: PRK10060 Location: 78402-80046 bp Feature: domain Description: PRK10060 Location: 78402-80046 bp Feature: gene Location: 81177-82862 bp Feature: domain Description: RVT_N Location: 81234-81474 bp Feature: domain Description: RVT_N Location: 8123 4-81474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81522-82158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81522-82158 bp Feature: domain Description: GIIM Note: maturase Location: 82212-82443 bp Feature: domain Description: GIIM Note: maturase Location: 82212-82443 bp Feature: domain Description: HNH Note: nucleases Location: 82695-82833 bp Feature: domain Description: HNH Note: nucleases Location: 82695-8283 3 bp Feature: gene Location: 82993-84162 bp Feature: domain Description: int Location: 82996-84013 bp Feature: domain Description: int Location: 82996-84013 bp Feature: gene Location: 84167-84406 bp Feature: domain Description: HTH_XRE Location: 84179-84323 bp Feature: domain Description: HTH_XRE Location: 84179-843 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), int (PHA02601), HTH_XRE (smart00530)