myRT

myRT report for GCA_000792885.1_AZPAE15011

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Seq: JTOJ01000014.1 (292257 bp)
Overview 1 RT 1: 61590-70433 bp 2 RT 2: 86698-97368 bp Neighborhood of RT #1 [61590, 70441] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [86698, 97433] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 61590-62264 bp Feature: domain Description: NTP_transferase_like_1 Location: 61596-62235 bp Feature: domain Description: NTP_transferase_like_1 Location: 61 596-62235 bp Feature: gene Location: 62261-63277 bp Feature: domain Description: COG3178 Location: 62264-63263 bp Feature: domain Description: COG31 78 Location: 62264-63263 bp Feature: gene Location: 64549-66261 bp Feature: RT Description: RVT_N Location: 64606-64849 bp Feature: RT Description: RVT_N Location: 64606-64849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64894-65530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64894-65530 bp Feature: domain Description: YkfC Location: 65740-65890 bp Feature: domain Description: YkfC Location: 65740-65890 bp Feature: domain Description: HNH Note: nucleases Location: 66067-66205 bp Feature: domain Description: HNH Note: nucleases Location: 66067-66205 bp Feature: gene Location: 66394-69168 bp Feature: domain Description: LptD Location: 66589-69154 bp Feature: domain Description: LptD Location: 66589-691 54 bp Feature: gene Location: 69227-70441 bp Feature: domain Description: PRK10770 Location: 69239-70433 bp Feature: domain Description: PRK1 0770 Location: 69239-70433 bp Feature: gene Location: 86698-88551 bp Feature: domain Description: PRK05658 Location: 86710-88549 bp Feature: domain Description: PRK05658 Location: 8671 0-88549 bp Feature: gene Location: 88658-92395 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 88766-89423 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 88766-89423 bp Feature: domain Description: PRK09776 Location: 89636-90107 bp Feature: domain Description: PRK09776 Location: 89636-901 07 bp Feature: domain Description: PAS Location: 90152-90689 bp Feature: domain Description: PAS Location: 901 52-90689 bp Feature: domain Description: PRK10060 Location: 90698-92345 bp Feature: domain Description: PRK1 0060 Location: 90698-92345 bp Feature: gene Location: 93476-95161 bp Feature: RT Description: RVT_N Location: 93533-93773 bp Feature: RT Description: RVT_N Location: 93533-93773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93821-94457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93821 -94457 bp Feature: domain Description: GIIM Note: maturase Location: 94511-94742 bp Feature: domain Description: GIIM Note: maturase Location: 9451 1 -94742 bp Feature: domain Description: HNH Note: nucleases Location: 94994-95132 bp Feature: domain Description: HNH Note: nucleases Location: 94994-951 32 bp Feature: gene Location: 95884-97005 bp Feature: domain Description: COG3177 Location: 95902-96994 bp Feature: domain Description: COG31 77 Location: 95902-96994 bp Feature: gene Location: 97098-97433 bp Feature: domain Description: NERD Location: 97197-97368 bp Feature: domain Description: NERD Location: 971 97-97368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein ), NERD (pfam08378)