myRT

myRT report for GCA_000793025.1_AZPAE15018

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Seq: JTOC01000033.1 (168757 bp)
Overview 1 RT 1: 145050-149824 bp Neighborhood of RT #1 [145050, 149824] DUF1566 Avd_like RVT-DGRs Dcm Feature: gene Location: 145050-145658 bp Feature: domain Description: DUF1566 Location: 145275-145641 bp Feature: domain Description: DUF1 566 Location: 1 45275-1 45641 bp Feature: gene Location: 145711-146067 bp Feature: domain Description: Avd_like Location: 145738-146044 bp Feature: domain Description: Avd_like Location: 1 45738-1 46044 bp Feature: gene Location: 146428-147447 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 146518-147277 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 4651 8-1 47277 bp Feature: gene Location: 147444-149357 bp Feature: domain Description: Dcm Location: 147480-149241 bp Feature: domain Description: Dcm Location: 1 47480-1 49241 bp Feature: gene Location: 149354-149824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: JTOC01000061.1 (2418 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: RT Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 2 133-2 2 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)