myRT

myRT report for GCA_000793295.1_AZPAE15061

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Seq: JTML01000120.1 (9229 bp)
Overview 1 RT 1: 6307-9228 bp Neighborhood of RT #1 [6307, 9228] RVT-GII GIIM Feature: gene Location: 6307-6486 bp Feature: gene Location: 6670-7068 bp Feature: gene Location: 7218-8486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7431-8088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7431 -8088 bp Feature: domain Description: GIIM Note: maturase Location: 8166-8388 bp Feature: domain Description: GIIM Note: maturase Location: 81 66-8388 bp Feature: gene Location: 8890-9228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTML01000006.1 (235027 bp)
Overview 1 RT 1: 49222-58083 bp 2 RT 2: 74347-84646 bp Neighborhood of RT #1 [49222, 58091] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74347, 84657] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49222-49896 bp Feature: domain Description: NTP_transferase_like_1 Location: 49228-49867 bp Feature: domain Description: NTP_transferase_like_1 Location: 492 2 8-49867 bp Feature: gene Location: 49893-50909 bp Feature: domain Description: COG3178 Location: 49896-50895 bp Feature: domain Description: COG3178 Location: 49896-50895 bp Feature: gene Location: 52181-53893 bp Feature: RT Description: RVT_N Location: 52238-52481 bp Feature: RT Description: RVT_N Location: 52 2 38-52 481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52526-53159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 52 6-53159 bp Feature: domain Description: YkfC Location: 53372-53522 bp Feature: domain Description: YkfC Location: 53372 -5352 2 bp Feature: domain Description: HNH Note: nucleases Location: 53699-53837 bp Feature: domain Description: HNH Note: nucleases Location: 53699-53837 bp Feature: gene Location: 54026-56818 bp Feature: domain Description: LptD Location: 54221-56804 bp Feature: domain Description: LptD Location: 542 2 1-56804 bp Feature: gene Location: 56877-58091 bp Feature: domain Description: PRK10770 Location: 56889-58083 bp Feature: domain Description: PRK10770 Location: 56889-58083 bp Feature: gene Location: 74347-76200 bp Feature: domain Description: PRK05658 Location: 74359-76198 bp Feature: domain Description: PRK05658 Location: 74359-76198 bp Feature: gene Location: 76307-80044 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76415-77072 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 76415-77072 bp Feature: domain Description: PRK09776 Location: 77285-77756 bp Feature: domain Description: PRK09776 Location: 772 85-77756 bp Feature: domain Description: PAS Location: 77828-78338 bp Feature: domain Description: PAS Location: 7782 8-78338 bp Feature: domain Description: PRK10060 Location: 78347-79994 bp Feature: domain Description: PRK10060 Location: 78347-79994 bp Feature: gene Location: 81125-82810 bp Feature: RT Description: RVT_N Location: 81182-81422 bp Feature: RT Description: RVT_N Location: 81182 -8142 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81470-82106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81470-82 106 bp Feature: domain Description: GIIM Note: maturase Location: 82160-82391 bp Feature: domain Description: GIIM Note: maturase Location: 82 160-82 391 bp Feature: domain Description: HNH Note: nucleases Location: 82643-82781 bp Feature: domain Description: HNH Note: nucleases Location: 82 643-82 781 bp Feature: gene Location: 83113-83274 bp Feature: gene Location: 83536-84657 bp Feature: domain Description: COG3177 Location: 83554-84646 bp Feature: domain Description: COG3177 Location: 83554-84646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )