myRT

myRT report for GCA_000793615.1_AZPAE14905

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Seq: JTSK01000011.1 (282895 bp)
Overview 1 RT 1: 224353-233212 bp Neighborhood of RT #1 [224353, 233241] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 224353-225567 bp Feature: domain Description: PRK10770 Location: 224365-225559 bp Feature: domain Description: PRK1 0770 Location: 224365-225559 bp Feature: gene Location: 225626-228436 bp Feature: domain Description: LptD Location: 225821-228422 bp Feature: domain Description: LptD Location: 225821 -228422 bp Feature: gene Location: 228569-230281 bp Feature: RT Description: RVT_N Location: 228626-228869 bp Feature: RT Description: RVT_N Location: 228626-228869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228914-229550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22891 4-229550 bp Feature: domain Description: YkfC Location: 229757-229910 bp Feature: domain Description: YkfC Location: 229757-22991 0 bp Feature: domain Description: HNH Note: nucleases Location: 230087-230225 bp Feature: domain Description: HNH Note: nucleases Location: 230087-230225 bp Feature: gene Location: 231554-232570 bp Feature: domain Description: COG3178 Location: 231557-232556 bp Feature: domain Description: COG31 78 Location: 231 557-232556 bp Feature: gene Location: 232567-233241 bp Feature: domain Description: NTP_transferase_like_1 Location: 232573-233212 bp Feature: domain Description: NTP_transferase_like_1 Location: 232573-23321 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: JTSK01000030.1 (122380 bp)
Overview 1 RT 1: 5406-8660 bp Neighborhood of RT #1 [5406, 8660] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 5406-5990 bp Feature: domain Description: DUF1566 Location: 5652-5976 bp Feature: domain Description: DUF1566 Location: 5652 -5976 bp Feature: gene Location: 6029-6385 bp Feature: domain Description: Avd_like Location: 6056-6359 bp Feature: domain Description: Avd_like Location: 6056-6359 bp Feature: gene Location: 6658-7797 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6835-7594 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6835-7594 bp Feature: gene Location: 8142-8384 bp Feature: gene Location: 8421-8660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs