myRT

myRT report for GCA_000793915.1_AZPAE14906

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Seq: JTSJ01000004.1 (282723 bp)
Overview 1 RT 1: 224353-233212 bp Neighborhood of RT #1 [224353, 233241] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 224353-225567 bp Feature: domain Description: PRK10770 Location: 224365-225559 bp Feature: domain Description: PRK1 0770 Location: 224365-225559 bp Feature: gene Location: 225626-228436 bp Feature: domain Description: LptD Location: 225821-228422 bp Feature: domain Description: LptD Location: 225821 -228422 bp Feature: gene Location: 228569-230281 bp Feature: RT Description: RVT_N Location: 228626-228869 bp Feature: RT Description: RVT_N Location: 228626-228869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228914-229550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22891 4-229550 bp Feature: domain Description: YkfC Location: 229757-229910 bp Feature: domain Description: YkfC Location: 229757-22991 0 bp Feature: domain Description: HNH Note: nucleases Location: 230087-230225 bp Feature: domain Description: HNH Note: nucleases Location: 230087-230225 bp Feature: gene Location: 231554-232570 bp Feature: domain Description: COG3178 Location: 231557-232556 bp Feature: domain Description: COG31 78 Location: 231 557-232556 bp Feature: gene Location: 232567-233241 bp Feature: domain Description: NTP_transferase_like_1 Location: 232573-233212 bp Feature: domain Description: NTP_transferase_like_1 Location: 232573-23321 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: JTSJ01000006.1 (140133 bp)
Overview 1 RT 1: 131474-134714 bp Neighborhood of RT #1 [131474, 134728] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 131474-131713 bp Feature: gene Location: 131750-131992 bp Feature: gene Location: 132337-133476 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 132514-133273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 132 514-1332 73 bp Feature: gene Location: 133749-134105 bp Feature: domain Description: Avd_like Location: 133776-134079 bp Feature: domain Description: Avd_like Location: 133776-134079 bp Feature: gene Location: 134144-134728 bp Feature: domain Description: DUF1566 Location: 134390-134714 bp Feature: domain Description: DUF1566 Location: 134390-134714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)