myRT

myRT report for GCA_000793955.1_AZPAE15034

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Seq: JTNM01000010.1 (237367 bp)
Overview 1 RT 1: 155059-165751 bp Neighborhood of RT #1 [155059, 165753] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 155059-155817 bp Feature: gene Location: 155894-156988 bp Feature: domain Description: INT_Rci_Hp1_C Location: 156404-156905 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 56404-1 56905 bp Feature: gene Location: 157290-158975 bp Feature: RT Description: RVT_N Location: 157347-157587 bp Feature: RT Description: RVT_N Location: 1 57347-1 57587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157635-158271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 57635-1 58271 bp Feature: domain Description: GIIM Note: maturase Location: 158325-158556 bp Feature: domain Description: GIIM Note: maturase Location: 1 58325-1 58556 bp Feature: domain Description: HNH Note: nucleases Location: 158808-158946 bp Feature: domain Description: HNH Note: nucleases Location: 1 58808-1 58946 bp Feature: gene Location: 160056-163793 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 160164-160821 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 601 64-1 60821 bp Feature: domain Description: PRK09776 Location: 161034-161505 bp Feature: domain Description: PRK09776 Location: 1 61 034-1 61 505 bp Feature: domain Description: PAS Location: 161550-162087 bp Feature: domain Description: PAS Location: 1 61 550-1 62087 bp Feature: domain Description: PRK10060 Location: 162096-163743 bp Feature: domain Description: PRK1 0060 Location: 1 62096-1 63743 bp Feature: gene Location: 163900-165753 bp Feature: domain Description: PRK05658 Location: 163912-165751 bp Feature: domain Description: PRK05658 Location: 1 6391 2-1 65751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)