myRT

myRT report for GCA_000794175.1_AZPAE14831

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Seq: JTVD01000009.1 (52816 bp)
Overview 1 RT 1: 46201-52709 bp Neighborhood of RT #1 [46201, 52813] restrict_AAA_1 restrict_AAA_1 COG4127 RVT-UG5 nitrilase Feature: gene Location: 46201-47952 bp Feature: domain Description: restrict_AAA_1 Location: 46204-46951 bp Feature: domain Description: restrict_AAA_1 Location: 46204-46951 bp Feature: domain Description: restrict_AAA_1 Location: 47278-47665 bp Feature: domain Description: restrict_AAA_1 Location: 47278-47665 bp Feature: gene Location: 48890-49882 bp Feature: domain Description: COG4127 Location: 48896-49871 bp Feature: domain Description: COG41 27 Location: 48896-49871 bp Feature: gene Location: 50252-52813 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50270-50765 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50270-50765 bp Feature: domain Description: nitrilase Location: 52127-52709 bp Feature: domain Description: nitrilase Location: 521 27-52709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT restrict_AAA_1 (TIGR04435), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), RVT-UG5, nitrilase (cl11424)

Seq: JTVD01000062.1 (34020 bp)
Overview 1 RT 1: 30235-33971 bp Neighborhood of RT #1 [30235, 34018] resist_ArsH KOG0389 SF2_C_SNF RVT_N RVT-GII GIIM HNHc Feature: gene Location: 30235-30957 bp Feature: domain Description: resist_ArsH Location: 30259-30913 bp Feature: domain Description: resist_ArsH Location: 302 59-30913 bp Feature: gene Location: 31015-32274 bp Feature: domain Description: KOG0389 Location: 31045-31168 bp Feature: domain Description: KOG0389 Location: 31045-31168 bp Feature: domain Description: SF2_C_SNF Location: 31714-32110 bp Feature: domain Description: SF2 _C_SNF Location: 31714-32 110 bp Feature: gene Location: 32342-34018 bp Feature: domain Description: RVT_N Location: 32360-32594 bp Feature: domain Description: RVT_N Location: 32 360-32 594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32645-33296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 645-332 96 bp Feature: domain Description: GIIM Note: maturase Location: 33350-33581 bp Feature: domain Description: GIIM Note: maturase Location: 33350-33581 bp Feature: domain Description: HNHc Note: nucleases Location: 33815-33971 bp Feature: domain Description: HNHc Note: nucleases Location: 33815-33971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT resist_ArsH (TIGR02690), KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase ), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)