myRT

myRT report for GCA_000794485.1_AZPAE14566

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Seq: JTXT01000011.1 (239061 bp)
Overview 1 RT 1: 49353-58212 bp 2 RT 2: 74476-84773 bp Neighborhood of RT #1 [49353, 58220] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74476, 84784] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49353-50027 bp Feature: domain Description: NTP_transferase_like_1 Location: 49359-49998 bp Feature: domain Description: NTP_transferase_like_1 Location: 49359-49998 bp Feature: gene Location: 50024-51040 bp Feature: domain Description: COG3178 Location: 50027-51026 bp Feature: domain Description: COG31 78 Location: 50027-51 026 bp Feature: gene Location: 52313-54025 bp Feature: RT Description: RVT_N Location: 52370-52613 bp Feature: RT Description: RVT_N Location: 52370-5261 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52658-53294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52658-53294 bp Feature: domain Description: YkfC Location: 53501-53654 bp Feature: domain Description: YkfC Location: 53501 -53654 bp Feature: domain Description: HNH Note: nucleases Location: 53831-53969 bp Feature: domain Description: HNH Note: nucleases Location: 53831 -53969 bp Feature: gene Location: 54158-56947 bp Feature: domain Description: LptD Location: 54353-56933 bp Feature: domain Description: LptD Location: 54353-56933 bp Feature: gene Location: 57006-58220 bp Feature: domain Description: PRK10770 Location: 57018-58212 bp Feature: domain Description: PRK1 0770 Location: 5701 8-5821 2 bp Feature: gene Location: 74476-76329 bp Feature: domain Description: PRK05658 Location: 74488-76327 bp Feature: domain Description: PRK05658 Location: 74488-76327 bp Feature: gene Location: 76436-80173 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76544-77201 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76544-77201 bp Feature: domain Description: PRK09776 Location: 77414-77885 bp Feature: domain Description: PRK09776 Location: 7741 4-77885 bp Feature: domain Description: PAS Location: 77942-78467 bp Feature: domain Description: PAS Location: 77942-78467 bp Feature: domain Description: PRK10060 Location: 78476-80123 bp Feature: domain Description: PRK1 0060 Location: 78476-801 23 bp Feature: gene Location: 81254-82939 bp Feature: RT Description: RVT_N Location: 81311-81551 bp Feature: RT Description: RVT_N Location: 81 31 1 -81 551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81599-82235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 599-82235 bp Feature: domain Description: GIIM Note: maturase Location: 82289-82520 bp Feature: domain Description: GIIM Note: maturase Location: 82289-82520 bp Feature: domain Description: HNH Note: nucleases Location: 82772-82910 bp Feature: domain Description: HNH Note: nucleases Location: 82772-8291 0 bp Feature: gene Location: 83267-83404 bp Feature: gene Location: 83663-84784 bp Feature: domain Description: COG3177 Location: 83681-84773 bp Feature: domain Description: COG31 77 Location: 83681 -84773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )