myRT

myRT report for GCA_000794725.1_AZPAE14699

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Seq: JTXG01000164.1 (27627 bp)
Overview 1 RT 1: 12499-23232 bp Neighborhood of RT #1 [12499, 23234] NERD COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 12499-12834 bp Feature: domain Description: NERD Location: 12598-12769 bp Feature: domain Description: NERD Location: 1 2598-1 2769 bp Feature: gene Location: 12927-14048 bp Feature: domain Description: COG3177 Location: 12945-14037 bp Feature: domain Description: COG31 77 Location: 1 2945-1 4037 bp Feature: gene Location: 14771-16456 bp Feature: RT Description: RVT_N Location: 14828-15068 bp Feature: RT Description: RVT_N Location: 1 4828-1 5068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15116-15752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 6-1 5752 bp Feature: domain Description: GIIM Note: maturase Location: 15806-16037 bp Feature: domain Description: GIIM Note: maturase Location: 1 5806-1 6037 bp Feature: domain Description: HNH Note: nucleases Location: 16289-16427 bp Feature: domain Description: HNH Note: nucleases Location: 1 6289-1 6427 bp Feature: gene Location: 17537-21274 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 17645-18302 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 7645-1 8302 bp Feature: domain Description: PRK09776 Location: 18515-18986 bp Feature: domain Description: PRK09776 Location: 1 851 5-1 8986 bp Feature: domain Description: PAS Location: 19031-19568 bp Feature: domain Description: PAS Location: 1 9031 -1 9568 bp Feature: domain Description: PRK10060 Location: 19577-21224 bp Feature: domain Description: PRK1 0060 Location: 1 9577-21 224 bp Feature: gene Location: 21381-23234 bp Feature: domain Description: PRK05658 Location: 21393-23232 bp Feature: domain Description: PRK05658 Location: 21 393-23232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)
PRK05658 (RNA polymerase sigma factor RpoD; Validated)