myRT

myRT report for GCA_000794745.1_AZPAE14701

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Seq: JTXE01000047.1 (28775 bp)
Overview 1 RT 1: 260-6504 bp Neighborhood of RT #1 [260, 6791] RVT-UG5 nitrilase COG4127 restrict_AAA_1 restrict_AAA_1 Feature: gene Location: 260-2740 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 263-692 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 263-692 bp Feature: domain Description: nitrilase Location: 2054-2636 bp Feature: domain Description: nitrilase Location: 2054-2636 bp Feature: gene Location: 3110-4102 bp Feature: domain Description: COG4127 Location: 3116-4091 bp Feature: domain Description: COG41 27 Location: 31 1 6-4091 bp Feature: gene Location: 5040-6791 bp Feature: domain Description: restrict_AAA_1 Location: 5043-5790 bp Feature: domain Description: restrict_AAA_1 Location: 5043-5790 bp Feature: domain Description: restrict_AAA_1 Location: 6117-6504 bp Feature: domain Description: restrict_AAA_1 Location: 61 1 7-6504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), restrict_AAA_1 (TIGR04435)

Seq: JTXE01000196.1 (1158 bp)
Overview 1 RT 1: 2-1155 bp Neighborhood of RT #1 [2, 1155] RVT_N RVT-GII Feature: gene Location: 2-541 bp Feature: domain Description: RVT_N Location: 59-296 bp Feature: domain Description: RVT_N Location: 59-2 96 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-536 bp Feature: gene Location: 811-939 bp Feature: gene Location: 970-1155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JTXE01000107.1 (1266 bp)
Overview 1 RT 1: 3-1134 bp Neighborhood of RT #1 [3, 1181] RVT-GII GIIM HNHc Feature: gene Location: 3-1181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-459 bp Feature: domain Description: GIIM Note: maturase Location: 513-744 bp Feature: domain Description: GIIM Note: maturase Location: 513 -744 bp Feature: domain Description: HNHc Note: nucleases Location: 978-1134 bp Feature: domain Description: HNHc Note: nucleases Location: 978-113 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)