myRT

myRT report for GCA_000794905.1_AZPAE14728

Download annotations/find similar RTs

Seq: JTWE01000035.1 (35908 bp)
Overview 1 RT 1: 1768-9079 bp Neighborhood of RT #1 [1768, 10134] AAA_21 AAA_21 RVT-UG5 YeeA DUF262 Feature: gene Location: 1768-2907 bp Feature: domain Description: AAA_21 Location: 1840-1909 bp Feature: domain Description: AAA_21 Location: 1 840-1 909 bp Feature: domain Description: AAA_21 Location: 2383-2713 bp Feature: domain Description: AAA_21 Location: 2383-271 3 bp Feature: gene Location: 2907-3464 bp Feature: gene Location: 3461-6481 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3956-4427 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3956-4427 bp Feature: gene Location: 6478-8259 bp Feature: domain Description: YeeA Location: 7345-8125 bp Feature: domain Description: YeeA Location: 7345-81 25 bp Feature: gene Location: 8263-10134 bp Feature: domain Description: DUF262 Location: 8311-9079 bp Feature: domain Description: DUF262 Location: 831 1 -9079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG5, YeeA (COG1002), DUF262 (pfam03235)

Seq: JTWE01000062.1 (230663 bp)
Overview 1 RT 1: 145539-156272 bp 2 RT 2: 172530-181350 bp Neighborhood of RT #1 [145539, 156274] NERD COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [172530, 181379] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 145539-145754 bp Feature: domain Description: NERD Location: 145566-145689 bp Feature: domain Description: NERD Location: 145566-145689 bp Feature: gene Location: 145967-147088 bp Feature: domain Description: COG3177 Location: 145985-147077 bp Feature: domain Description: COG3177 Location: 145985-147077 bp Feature: gene Location: 147811-149496 bp Feature: domain Description: RVT_N Location: 147868-148108 bp Feature: domain Description: RVT_N Location: 147868-148108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148156-148792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148156-148792 bp Feature: domain Description: GIIM Note: maturase Location: 148846-149077 bp Feature: domain Description: GIIM Note: maturase Location: 148846-149077 bp Feature: domain Description: HNH Note: nucleases Location: 149329-149467 bp Feature: domain Description: HNH Note: nucleases Location: 14932 9-149467 bp Feature: gene Location: 150577-154314 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 150685-151342 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 150685-151342 bp Feature: domain Description: PRK09776 Location: 151555-152026 bp Feature: domain Description: PRK09776 Location: 151555-152 02 6 bp Feature: domain Description: PAS Location: 152083-152608 bp Feature: domain Description: PAS Location: 152 083-152 608 bp Feature: domain Description: PRK10060 Location: 152620-154264 bp Feature: domain Description: PRK10060 Location: 152 62 0-1542 64 bp Feature: gene Location: 154421-156274 bp Feature: domain Description: PRK05658 Location: 154433-156272 bp Feature: domain Description: PRK05658 Location: 154433-1562 72 bp Feature: gene Location: 172530-173744 bp Feature: domain Description: PRK10770 Location: 172542-173736 bp Feature: domain Description: PRK10770 Location: 172 542 -173736 bp Feature: gene Location: 173803-176574 bp Feature: domain Description: LptD Location: 173998-176560 bp Feature: domain Description: LptD Location: 173998-176560 bp Feature: gene Location: 176707-178419 bp Feature: domain Description: RVT_N Location: 176764-177007 bp Feature: domain Description: RVT_N Location: 176764-177007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177052-177688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177052 -177688 bp Feature: domain Description: YkfC Location: 177898-178048 bp Feature: domain Description: YkfC Location: 177898-178048 bp Feature: domain Description: HNH Note: nucleases Location: 178225-178363 bp Feature: domain Description: HNH Note: nucleases Location: 1782 2 5-178363 bp Feature: gene Location: 179692-180708 bp Feature: domain Description: COG3178 Location: 179695-180694 bp Feature: domain Description: COG3178 Location: 179695-180694 bp Feature: gene Location: 180705-181379 bp Feature: domain Description: NTP_transferase_like_1 Location: 180711-181350 bp Feature: domain Description: NTP_transferase_like_1 Location: 180711-181350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)
PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: JTWE01000078.1 (37358 bp)
Overview 1 RT 1: 2-2923 bp Neighborhood of RT #1 [2, 2923] RVT-GII GIIM Feature: gene Location: 2-208 bp Feature: gene Location: 744-2012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: gene Location: 2162-2560 bp Feature: gene Location: 2744-2923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTWE01000065.1 (74865 bp)
Overview 1 RT 1: 28520-34106 bp Neighborhood of RT #1 [28520, 34106] HDOD YgfZ RVT-GII YkfC HNH SdhE Feature: gene Location: 28520-29356 bp Feature: domain Description: HDOD Location: 28523-29351 bp Feature: domain Description: HDOD Location: 28523-29351 bp Feature: gene Location: 29457-30401 bp Feature: domain Description: YgfZ Location: 29466-30366 bp Feature: domain Description: YgfZ Location: 294 66-30366 bp Feature: gene Location: 32124-33443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32127-32703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32127-32703 bp Feature: domain Description: YkfC Location: 32901-33057 bp Feature: domain Description: YkfC Location: 32901-33057 bp Feature: domain Description: HNH Note: nucleases Location: 33240-33378 bp Feature: domain Description: HNH Note: nucleases Location: 3324 0-33378 bp Feature: gene Location: 33519-33773 bp Feature: domain Description: SdhE Location: 33525-33765 bp Feature: domain Description: SdhE Location: 33525-33765 bp Feature: gene Location: 33912-34106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDOD (pfam08668), YgfZ (COG0354), RVT-GII, YkfC (COG3344), HNH (pfam01844), SdhE (COG2938)