myRT

myRT report for GCA_000794925.1_AZPAE14729

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Seq: JTWD01000045.1 (71654 bp)
Overview 1 RT 1: 13512-22332 bp Neighborhood of RT #1 [13512, 22361] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 13512-14726 bp Feature: domain Description: PRK10770 Location: 13524-14718 bp Feature: domain Description: PRK1 0770 Location: 1 3524-1 471 8 bp Feature: gene Location: 14785-17556 bp Feature: domain Description: LptD Location: 14980-17542 bp Feature: domain Description: LptD Location: 1 4980-1 7542 bp Feature: gene Location: 17689-19401 bp Feature: domain Description: RVT_N Location: 17746-17989 bp Feature: domain Description: RVT_N Location: 1 7746-1 7989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18034-18670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8034-1 8670 bp Feature: domain Description: YkfC Location: 18880-19030 bp Feature: domain Description: YkfC Location: 1 8880-1 9030 bp Feature: domain Description: HNH Note: nucleases Location: 19207-19345 bp Feature: domain Description: HNH Note: nucleases Location: 1 9207-1 9345 bp Feature: gene Location: 20674-21690 bp Feature: domain Description: COG3178 Location: 20677-21676 bp Feature: domain Description: COG31 78 Location: 20677-21 676 bp Feature: gene Location: 21687-22361 bp Feature: domain Description: NTP_transferase_like_1 Location: 21693-22332 bp Feature: domain Description: NTP_transferase_like_1 Location: 21 693-22332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: JTWD01000030.1 (161561 bp)
Overview 1 RT 1: 70474-76055 bp Neighborhood of RT #1 [70474, 76060] SdhE RVT-GII YkfC HNH YgfZ HDOD Feature: gene Location: 70474-70668 bp Feature: gene Location: 70807-71061 bp Feature: domain Description: SdhE Location: 70813-71053 bp Feature: domain Description: SdhE Location: 70813-71053 bp Feature: gene Location: 71137-72456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71140-71716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71140-71716 bp Feature: domain Description: YkfC Location: 71914-72070 bp Feature: domain Description: YkfC Location: 71914-72 070 bp Feature: domain Description: HNH Note: nucleases Location: 72253-72391 bp Feature: domain Description: HNH Note: nucleases Location: 72 2 53-72 391 bp Feature: gene Location: 74179-75123 bp Feature: domain Description: YgfZ Location: 74188-75088 bp Feature: domain Description: YgfZ Location: 74188-75088 bp Feature: gene Location: 75224-76060 bp Feature: domain Description: HDOD Location: 75227-76055 bp Feature: domain Description: HDOD Location: 752 2 7-76055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SdhE (COG2938), RVT-GII, YkfC (COG3344), HNH (pfam01844), YgfZ (COG0354), HDOD (pfam08668)

Seq: JTWD01000043.1 (35907 bp)
Overview 1 RT 1: 1766-9078 bp Neighborhood of RT #1 [1766, 10133] AAA_21 AAA_21 RVT-UG5 YeeA DUF262 Feature: gene Location: 1766-2905 bp Feature: domain Description: AAA_21 Location: 1838-1907 bp Feature: domain Description: AAA_21 Location: 183 8-1907 bp Feature: domain Description: AAA_21 Location: 2381-2711 bp Feature: domain Description: AAA_21 Location: 23 81-2711 bp Feature: gene Location: 2905-3462 bp Feature: gene Location: 3459-6479 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3954-4425 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3 954-4425 bp Feature: gene Location: 7149-8258 bp Feature: domain Description: YeeA Location: 7344-8124 bp Feature: domain Description: YeeA Location: 73 44-8124 bp Feature: gene Location: 8262-10133 bp Feature: domain Description: DUF262 Location: 8310-9078 bp Feature: domain Description: DUF262 Location: 83 10-9078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG5, YeeA (COG1002), DUF262 (pfam03235)

Seq: JTWD01000059.1 (59774 bp)
Overview 1 RT 1: 56110-59484 bp Neighborhood of RT #1 [56110, 59573] NERD COG3177 RVT-GII RVT-GII GIIM Feature: gene Location: 56110-56325 bp Feature: domain Description: NERD Location: 56137-56260 bp Feature: domain Description: NERD Location: 56137-56260 bp Feature: gene Location: 56538-57659 bp Feature: domain Description: COG3177 Location: 56556-57648 bp Feature: domain Description: COG3177 Location: 56556-5764 8 bp Feature: gene Location: 58743-59573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58746-59145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5874 6-5914 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59163-59247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59163-5924 7 bp Feature: domain Description: GIIM Note: maturase Location: 59301-59484 bp Feature: domain Description: GIIM Note: maturase Location: 59301-594 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), COG3177 (Fic family protein ), RVT-GII, GIIM (pfam08388)

Seq: JTWD01000069.1 (38184 bp)
Overview 1 RT 1: 20-3229 bp Neighborhood of RT #1 [20, 3229] DUF772 RVT-GII GIIM Feature: gene Location: 20-661 bp Feature: domain Description: DUF772 Location: 170-365 bp Feature: domain Description: DUF772 Location: 170-365 bp Feature: gene Location: 1050-2318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263-1920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263-1920 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2220 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2220 bp Feature: gene Location: 2468-2866 bp Feature: gene Location: 3050-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)