myRT

myRT report for GCA_000795285.1_AZPAE14823

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Seq: JTVL01000007.1 (317617 bp)
Overview 1 RT 1: 82247-89394 bp Neighborhood of RT #1 [82247, 89558] STN TonB-siderophor YHI9 RVT-UG2 PRK06333 HxlR Feature: gene Location: 82247-84649 bp Feature: domain Description: STN Location: 82367-82520 bp Feature: domain Description: STN Location: 82367-82520 bp Feature: domain Description: TonB-siderophor Location: 82628-84587 bp Feature: domain Description: TonB-siderophor Location: 82628-84587 bp Feature: gene Location: 84810-85646 bp Feature: domain Description: YHI9 Location: 84822-85638 bp Feature: domain Description: YHI9 Location: 84822-85638 bp Feature: gene Location: 85830-87176 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 86079-86865 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 86079-86865 bp Feature: gene Location: 87675-88943 bp Feature: domain Description: PRK06333 Location: 87681-88938 bp Feature: domain Description: PRK06333 Location: 87681 -88938 bp Feature: gene Location: 89052-89558 bp Feature: domain Description: HxlR Location: 89076-89394 bp Feature: domain Description: HxlR Location: 89076-89394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STN (smart00965), TonB-siderophor (TIGR01783), YHI9 (COG0384), RVT-UG2, PRK06333 (beta-ketoacyl-ACP synthase), HxlR (pfam01638)

Seq: JTVL01000011.1 (124439 bp)
Overview 1 RT 1: 70059-76030 bp Neighborhood of RT #1 [70059, 76035] PRK00024 RVT_N RVT-GII GIIM HNHc PRK05579 dut Feature: gene Location: 70059-70607 bp Feature: gene Location: 70624-71298 bp Feature: domain Description: PRK00024 Location: 70627-71296 bp Feature: domain Description: PRK0002 4 Location: 7062 7-712 96 bp Feature: gene Location: 72470-74152 bp Feature: domain Description: RVT_N Location: 72479-72722 bp Feature: domain Description: RVT_N Location: 72 479-72 72 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72770-73421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 770-7342 1 bp Feature: domain Description: GIIM Note: maturase Location: 73499-73727 bp Feature: domain Description: GIIM Note: maturase Location: 73499-7372 7 bp Feature: domain Description: HNHc Note: nucleases Location: 73955-74111 bp Feature: domain Description: HNHc Note: nucleases Location: 73955-74111 bp Feature: gene Location: 74364-75572 bp Feature: domain Description: PRK05579 Location: 74370-75564 bp Feature: domain Description: PRK05579 Location: 74370-75564 bp Feature: gene Location: 75580-76035 bp Feature: domain Description: dut Location: 75586-76030 bp Feature: domain Description: dut Location: 75586-76030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), dut (TIGR00576)

Seq: JTVL01000047.1 (37370 bp)
Overview 1 RT 1: 31819-37368 bp Neighborhood of RT #1 [31819, 37368] CHD CHD RVT-GII GIIM Feature: gene Location: 31819-33363 bp Feature: domain Description: CHD Location: 32035-32449 bp Feature: domain Description: CHD Location: 3 203 5-3 2449 bp Feature: domain Description: CHD Location: 32677-33166 bp Feature: domain Description: CHD Location: 3 2677-3 3 166 bp Feature: gene Location: 34447-34626 bp Feature: gene Location: 35358-36626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35571-36228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5571-3 6228 bp Feature: domain Description: GIIM Note: maturase Location: 36306-36528 bp Feature: domain Description: GIIM Note: maturase Location: 3 63 06-3 6528 bp Feature: gene Location: 37162-37368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388)