myRT

myRT report for GCA_000795365.1_AZPAE14827

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Seq: JTVH01000037.1 (141499 bp)
Overview 1 RT 1: 49519-58378 bp 2 RT 2: 74642-84939 bp Neighborhood of RT #1 [49519, 58386] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74642, 84950] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49519-50193 bp Feature: domain Description: NTP_transferase_like_1 Location: 49525-50164 bp Feature: domain Description: NTP_transferase_like_1 Location: 49525-501 64 bp Feature: gene Location: 50190-51206 bp Feature: domain Description: COG3178 Location: 50193-51192 bp Feature: domain Description: COG31 78 Location: 501 93-51 1 92 bp Feature: gene Location: 52479-54191 bp Feature: RT Description: RVT_N Location: 52536-52779 bp Feature: RT Description: RVT_N Location: 52536-52779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52824-53460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52824-53460 bp Feature: domain Description: YkfC Location: 53667-53820 bp Feature: domain Description: YkfC Location: 53667-53820 bp Feature: domain Description: HNH Note: nucleases Location: 53997-54135 bp Feature: domain Description: HNH Note: nucleases Location: 53997-541 35 bp Feature: gene Location: 54324-57113 bp Feature: domain Description: LptD Location: 54519-57099 bp Feature: domain Description: LptD Location: 5451 9-57099 bp Feature: gene Location: 57172-58386 bp Feature: domain Description: PRK10770 Location: 57184-58378 bp Feature: domain Description: PRK1 0770 Location: 571 84-58378 bp Feature: gene Location: 74642-76495 bp Feature: domain Description: PRK05658 Location: 74654-76493 bp Feature: domain Description: PRK05658 Location: 74654-76493 bp Feature: gene Location: 76602-80339 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76710-77367 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 7671 0-77367 bp Feature: domain Description: PRK09776 Location: 77580-78051 bp Feature: domain Description: PRK09776 Location: 77580-78051 bp Feature: domain Description: PAS Location: 78108-78633 bp Feature: domain Description: PAS Location: 781 08-78633 bp Feature: domain Description: PRK10060 Location: 78642-80289 bp Feature: domain Description: PRK1 0060 Location: 78642-80289 bp Feature: gene Location: 81420-83105 bp Feature: RT Description: RVT_N Location: 81477-81717 bp Feature: RT Description: RVT_N Location: 81 477-81 71 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81765-82401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 765-82401 bp Feature: domain Description: GIIM Note: maturase Location: 82455-82686 bp Feature: domain Description: GIIM Note: maturase Location: 82455-82686 bp Feature: domain Description: HNH Note: nucleases Location: 82938-83076 bp Feature: domain Description: HNH Note: nucleases Location: 82938-83076 bp Feature: gene Location: 83433-83570 bp Feature: gene Location: 83829-84950 bp Feature: domain Description: COG3177 Location: 83847-84939 bp Feature: domain Description: COG31 77 Location: 83847-84939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )