myRT

myRT report for GCA_000795465.1_AZPAE13853

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Seq: JTZM01000009.1 (345675 bp)
Overview 1 RT 1: 263990-274298 bp Neighborhood of RT #1 [263990, 274300] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 263990-265111 bp Feature: domain Description: COG3177 Location: 264008-265100 bp Feature: domain Description: COG31 77 Location: 264008-2651 00 bp Feature: gene Location: 265373-265534 bp Feature: gene Location: 265837-267522 bp Feature: RT Description: RVT_N Location: 265894-266134 bp Feature: RT Description: RVT_N Location: 265894-2661 34 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266182-266818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2661 82-26681 8 bp Feature: domain Description: GIIM Note: maturase Location: 266872-267103 bp Feature: domain Description: GIIM Note: maturase Location: 266872-2671 03 bp Feature: domain Description: HNH Note: nucleases Location: 267355-267493 bp Feature: domain Description: HNH Note: nucleases Location: 267355-267493 bp Feature: gene Location: 268603-272340 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 268711-269368 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 26871 1 -269368 bp Feature: domain Description: PRK09776 Location: 269581-270052 bp Feature: domain Description: PRK09776 Location: 269581 -270052 bp Feature: domain Description: PAS Location: 270103-270634 bp Feature: domain Description: PAS Location: 2701 03-270634 bp Feature: domain Description: PRK10060 Location: 270643-272290 bp Feature: domain Description: PRK1 0060 Location: 270643-272290 bp Feature: gene Location: 272447-274300 bp Feature: domain Description: PRK05658 Location: 272459-274298 bp Feature: domain Description: PRK05658 Location: 272459-274298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: JTZM01000017.1 (16761 bp)
Overview 1 RT 1: 409-3564 bp Neighborhood of RT #1 [409, 3564] RVT-GII GIIM IS5 Feature: gene Location: 409-660 bp Feature: gene Location: 712-912 bp Feature: gene Location: 971-2239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184-1841 bp Feature: domain Description: GIIM Note: maturase Location: 1919-2141 bp Feature: domain Description: GIIM Note: maturase Location: 1919-2 141 bp Feature: gene Location: 2732-3271 bp Feature: domain Description: IS5 Location: 2921-3248 bp Feature: domain Description: IS5 Location: 2 92 1-32 48 bp Feature: gene Location: 3436-3564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388)