myRT

myRT report for GCA_000795585.1_AZPAE13866

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Seq: JTZH01000005.1 (432717 bp)
Overview 1 RT 1: 63244-72088 bp 2 RT 2: 88352-98649 bp Neighborhood of RT #1 [63244, 72096] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [88352, 98660] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 63244-63918 bp Feature: domain Description: NTP_transferase_like_1 Location: 63250-63889 bp Feature: domain Description: NTP_transferase_like_1 Location: 63250-63889 bp Feature: gene Location: 63915-64931 bp Feature: domain Description: COG3178 Location: 63918-64917 bp Feature: domain Description: COG31 78 Location: 6391 8-6491 7 bp Feature: gene Location: 66204-67916 bp Feature: RT Description: RVT_N Location: 66261-66504 bp Feature: RT Description: RVT_N Location: 66261 -66504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66549-67185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66549-671 85 bp Feature: domain Description: YkfC Location: 67392-67545 bp Feature: domain Description: YkfC Location: 67392-67545 bp Feature: domain Description: HNH Note: nucleases Location: 67722-67860 bp Feature: domain Description: HNH Note: nucleases Location: 67722-67860 bp Feature: gene Location: 68049-70823 bp Feature: domain Description: LptD Location: 68244-70809 bp Feature: domain Description: LptD Location: 68244-70809 bp Feature: gene Location: 70882-72096 bp Feature: domain Description: PRK10770 Location: 70894-72088 bp Feature: domain Description: PRK1 0770 Location: 70894-72088 bp Feature: gene Location: 88352-90205 bp Feature: domain Description: PRK05658 Location: 88364-90203 bp Feature: domain Description: PRK05658 Location: 88364-90203 bp Feature: gene Location: 90312-94049 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 90420-91077 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 90420-91 077 bp Feature: domain Description: PRK09776 Location: 91290-91761 bp Feature: domain Description: PRK09776 Location: 91 290-91 761 bp Feature: domain Description: PAS Location: 91806-92343 bp Feature: domain Description: PAS Location: 91 806-92343 bp Feature: domain Description: PRK10060 Location: 92352-93999 bp Feature: domain Description: PRK1 0060 Location: 92352-93999 bp Feature: gene Location: 95130-96815 bp Feature: RT Description: RVT_N Location: 95187-95427 bp Feature: RT Description: RVT_N Location: 951 87-95427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95475-96111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95475-961 1 1 bp Feature: domain Description: GIIM Note: maturase Location: 96165-96396 bp Feature: domain Description: GIIM Note: maturase Location: 961 65-96396 bp Feature: domain Description: HNH Note: nucleases Location: 96648-96786 bp Feature: domain Description: HNH Note: nucleases Location: 96648-96786 bp Feature: gene Location: 97143-97280 bp Feature: gene Location: 97539-98660 bp Feature: domain Description: COG3177 Location: 97557-98649 bp Feature: domain Description: COG31 77 Location: 97557-98649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: JTZH01000101.1 (3071 bp)
Overview 1 RT 1: 1-3066 bp Neighborhood of RT #1 [1, 3068] RVT_N RVT-GII GIIM HNHc DUF3275 Feature: gene Location: 1-555 bp Feature: gene Location: 703-840 bp Feature: gene Location: 1100-2818 bp Feature: RT Description: RVT_N Location: 1157-1400 bp Feature: RT Description: RVT_N Location: 1157-1400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445-2096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445-2 096 bp Feature: domain Description: GIIM Note: maturase Location: 2150-2381 bp Feature: domain Description: GIIM Note: maturase Location: 2 150-2 381 bp Feature: domain Description: HNHc Note: nucleases Location: 2615-2771 bp Feature: domain Description: HNHc Note: nucleases Location: 2 615-2 771 bp Feature: gene Location: 2937-3068 bp Feature: domain Description: DUF3275 Location: 2940-3066 bp Feature: domain Description: DUF32 75 Location: 2 940-3066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)