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myRT report for GCA_000795985.1_AZPAE14390
Download annotations/find similar RTs
Seq:
JTYU01000063.1 (26966 bp)
Overview
1
RT 1: 1702-6232 bp
Neighborhood of RT #1 [1702, 6303]
AlpA
IS5
RVT-GII
GIIM
IS5
Inovirus_Gp2
Feature: gene
Location: 1702-1914 bp
Feature: domain
Description: AlpA
Location: 1705-1882 bp
Feature: domain
Description: AlpA
Location: 1 705-1 882 bp
Feature: gene
Location: 2253-2792 bp
Feature: domain
Description: IS5
Location: 2442-2769 bp
Feature: domain
Description: IS5
Location: 2442-2769 bp
Feature: gene
Location: 3285-4553 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3498-4155 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3498-41 55 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 4233-4455 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 4233-4455 bp
Feature: gene
Location: 4625-5083 bp
Feature: domain
Description: IS5
Location: 4628-5057 bp
Feature: domain
Description: IS5
Location: 4628-5057 bp
Feature: gene
Location: 5350-6303 bp
Feature: domain
Description: Inovirus_Gp2
Location: 5788-6232 bp
Feature: domain
Description: Inovirus_Gp2
Location: 5788-6232 bp
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Associated domains:
myRT
AlpA (COG3311)
,
IS5 (COG3039)
,
RVT-GII
,
GIIM (pfam08388)
,
Inovirus_Gp2 (pfam11726)