myRT

myRT report for GCA_000796205.1_AZPAE14415

Download annotations/find similar RTs

Seq: JTYL01000002.1 (231545 bp)
Overview 1 RT 1: 85-2924 bp Neighborhood of RT #1 [85, 2924] RVT-GII GIIM Feature: gene Location: 85-252 bp Feature: gene Location: 745-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1 61 5 bp Feature: domain Description: GIIM Note: maturase Location: 1693-1915 bp Feature: domain Description: GIIM Note: maturase Location: 1 693-1 91 5 bp Feature: gene Location: 2163-2561 bp Feature: gene Location: 2745-2924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTYL01000018.1 (406832 bp)
Overview 1 RT 1: 49286-58127 bp 2 RT 2: 74391-84316 bp Neighborhood of RT #1 [49286, 58135] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74391, 84399] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH int HTH_XRE Feature: gene Location: 49286-49960 bp Feature: domain Description: NTP_transferase_like_1 Location: 49292-49931 bp Feature: domain Description: NTP_transferase_like_1 Location: 492 92 -49931 bp Feature: gene Location: 49957-50973 bp Feature: domain Description: COG3178 Location: 49960-50959 bp Feature: domain Description: COG3178 Location: 49960-50959 bp Feature: gene Location: 52246-53958 bp Feature: domain Description: RVT_N Location: 52303-52546 bp Feature: domain Description: RVT_N Location: 52 303-52 546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52591-53227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 591-532 2 7 bp Feature: domain Description: YkfC Location: 53437-53587 bp Feature: domain Description: YkfC Location: 53437-53587 bp Feature: domain Description: HNH Note: nucleases Location: 53764-53902 bp Feature: domain Description: HNH Note: nucleases Location: 53764-53902 bp Feature: gene Location: 54091-56862 bp Feature: domain Description: LptD Location: 54286-56848 bp Feature: domain Description: LptD Location: 542 86-56848 bp Feature: gene Location: 56921-58135 bp Feature: domain Description: PRK10770 Location: 56933-58127 bp Feature: domain Description: PRK10770 Location: 56933-5812 7 bp Feature: gene Location: 74391-76244 bp Feature: domain Description: PRK05658 Location: 74403-76242 bp Feature: domain Description: PRK05658 Location: 74403-762 42 bp Feature: gene Location: 76351-80088 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76459-77116 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 76459-77116 bp Feature: domain Description: PRK09776 Location: 77329-77800 bp Feature: domain Description: PRK09776 Location: 7732 9-77800 bp Feature: domain Description: PAS Location: 77857-78382 bp Feature: domain Description: PAS Location: 77857-78382 bp Feature: domain Description: PRK10060 Location: 78394-80038 bp Feature: domain Description: PRK10060 Location: 78394-80038 bp Feature: gene Location: 81169-82854 bp Feature: domain Description: RVT_N Location: 81226-81466 bp Feature: domain Description: RVT_N Location: 812 2 6-81466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81514-82150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81514-82 150 bp Feature: domain Description: GIIM Note: maturase Location: 82204-82435 bp Feature: domain Description: GIIM Note: maturase Location: 82 2 04-82 435 bp Feature: domain Description: HNH Note: nucleases Location: 82687-82825 bp Feature: domain Description: HNH Note: nucleases Location: 82 687-82 82 5 bp Feature: gene Location: 82971-84155 bp Feature: domain Description: int Location: 82974-83991 bp Feature: domain Description: int Location: 82 974-83991 bp Feature: gene Location: 84160-84399 bp Feature: domain Description: HTH_XRE Location: 84172-84316 bp Feature: domain Description: HTH_XRE Location: 84172 -84316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), int (PHA02601), HTH_XRE (smart00530)

Seq: JTYL01000053.1 (35910 bp)
Overview 1 RT 1: 25776-33948 bp Neighborhood of RT #1 [25776, 34142] DUF262 YeeA RVT-UG5 AAA_21 AAA_21 Feature: gene Location: 25776-27647 bp Feature: domain Description: DUF262 Location: 25824-26592 bp Feature: domain Description: DUF262 Location: 25824-26592 bp Feature: gene Location: 27651-29432 bp Feature: domain Description: YeeA Location: 28518-29298 bp Feature: domain Description: YeeA Location: 28518-29298 bp Feature: gene Location: 29429-32449 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29924-30395 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29924-3 03 95 bp Feature: gene Location: 32446-33003 bp Feature: gene Location: 33003-34142 bp Feature: domain Description: AAA_21 Location: 33075-33144 bp Feature: domain Description: AAA_21 Location: 3 3 075-3 3 144 bp Feature: domain Description: AAA_21 Location: 33618-33948 bp Feature: domain Description: AAA_21 Location: 3 3 618-3 3 948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), YeeA (COG1002), RVT-UG5, AAA_21 (pfam13304)