myRT

myRT report for GCA_000796255.1_AZPAE14437

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Seq: JTYJ01000044.1 (84265 bp)
Overview 1 RT 1: 2200-12892 bp Neighborhood of RT #1 [2200, 12894] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 2200-2958 bp Feature: gene Location: 3035-4129 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3545-4046 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3545-4046 bp Feature: gene Location: 4431-6116 bp Feature: RT Description: RVT_N Location: 4488-4728 bp Feature: RT Description: RVT_N Location: 4488-4728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4776-5412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4776-541 2 bp Feature: domain Description: GIIM Note: maturase Location: 5466-5697 bp Feature: domain Description: GIIM Note: maturase Location: 5466-5697 bp Feature: domain Description: HNH Note: nucleases Location: 5949-6087 bp Feature: domain Description: HNH Note: nucleases Location: 5949-6087 bp Feature: gene Location: 7197-10934 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 7305-7962 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 7305-7962 bp Feature: domain Description: PRK09776 Location: 8175-8646 bp Feature: domain Description: PRK09776 Location: 81 75-8646 bp Feature: domain Description: PAS Location: 8691-9228 bp Feature: domain Description: PAS Location: 8691 -9228 bp Feature: domain Description: PRK10060 Location: 9237-10884 bp Feature: domain Description: PRK1 0060 Location: 9237-1 0884 bp Feature: gene Location: 11041-12894 bp Feature: domain Description: PRK05658 Location: 11053-12892 bp Feature: domain Description: PRK05658 Location: 1 1 053-1 2892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)