myRT

myRT report for GCA_000796295.1_AZPAE14442

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Seq: JTYH01000011.1 (205688 bp)
Overview 1 RT 1: 49199-58042 bp 2 RT 2: 74307-84606 bp Neighborhood of RT #1 [49199, 58050] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74307, 84617] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49199-49873 bp Feature: domain Description: NTP_transferase_like_1 Location: 49205-49844 bp Feature: domain Description: NTP_transferase_like_1 Location: 49205-49844 bp Feature: gene Location: 49870-50886 bp Feature: domain Description: COG3178 Location: 49873-50872 bp Feature: domain Description: COG31 78 Location: 49873-50872 bp Feature: gene Location: 52158-53870 bp Feature: RT Description: RVT_N Location: 52215-52458 bp Feature: RT Description: RVT_N Location: 5221 5-52458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52503-53136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52503-531 36 bp Feature: domain Description: YkfC Location: 53349-53499 bp Feature: domain Description: YkfC Location: 53349-53499 bp Feature: domain Description: HNH Note: nucleases Location: 53676-53814 bp Feature: domain Description: HNH Note: nucleases Location: 53676-5381 4 bp Feature: gene Location: 54003-56777 bp Feature: domain Description: LptD Location: 54198-56763 bp Feature: domain Description: LptD Location: 541 98-56763 bp Feature: gene Location: 56836-58050 bp Feature: domain Description: PRK10770 Location: 56848-58042 bp Feature: domain Description: PRK1 0770 Location: 56848-58042 bp Feature: gene Location: 74307-76160 bp Feature: domain Description: PRK05658 Location: 74319-76158 bp Feature: domain Description: PRK05658 Location: 7431 9-761 58 bp Feature: gene Location: 76267-80004 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76375-77032 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76375-77032 bp Feature: domain Description: PRK09776 Location: 77245-77716 bp Feature: domain Description: PRK09776 Location: 77245-7771 6 bp Feature: domain Description: PAS Location: 77776-78298 bp Feature: domain Description: PAS Location: 77776-78298 bp Feature: domain Description: PRK10060 Location: 78307-79954 bp Feature: domain Description: PRK1 0060 Location: 78307-79954 bp Feature: gene Location: 81085-82770 bp Feature: RT Description: RVT_N Location: 81142-81382 bp Feature: RT Description: RVT_N Location: 81 1 42-81 382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81430-82066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 430-82066 bp Feature: domain Description: GIIM Note: maturase Location: 82120-82351 bp Feature: domain Description: GIIM Note: maturase Location: 821 20-82351 bp Feature: domain Description: HNH Note: nucleases Location: 82603-82741 bp Feature: domain Description: HNH Note: nucleases Location: 82603-82741 bp Feature: gene Location: 83073-83234 bp Feature: gene Location: 83496-84617 bp Feature: domain Description: COG3177 Location: 83514-84606 bp Feature: domain Description: COG31 77 Location: 8351 4-84606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: JTYH01000057.1 (71319 bp)
Overview 1 RT 1: 65768-71317 bp Neighborhood of RT #1 [65768, 71317] CHD CHD RVT-GII GIIM Feature: gene Location: 65768-67312 bp Feature: domain Description: CHD Location: 65984-66398 bp Feature: domain Description: CHD Location: 65984-66398 bp Feature: domain Description: CHD Location: 66626-67115 bp Feature: domain Description: CHD Location: 6662 6-67115 bp Feature: gene Location: 68396-68575 bp Feature: gene Location: 69307-70575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69520-70177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6952 0-70177 bp Feature: domain Description: GIIM Note: maturase Location: 70255-70477 bp Feature: domain Description: GIIM Note: maturase Location: 702 55-70477 bp Feature: gene Location: 71138-71317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388)