myRT

myRT report for GCA_000796385.1_AZPAE14499

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Seq: JTYD01000048.1 (2423 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: domain Description: RVT_N Location: 675-91 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1 61 4 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1 668-1 899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 21 33-2289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JTYD01000060.1 (21734 bp)
Overview 1 RT 1: 3-4664 bp Neighborhood of RT #1 [3, 4876] RVT-UG5 nitrilase COG4127 TIGR02646 Feature: gene Location: 3-2573 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30-525 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30-52 5 bp Feature: domain Description: nitrilase Location: 1887-2469 bp Feature: domain Description: nitrilase Location: 1887-2 469 bp Feature: gene Location: 2943-3935 bp Feature: domain Description: COG4127 Location: 2949-3924 bp Feature: domain Description: COG412 7 Location: 2 949-392 4 bp Feature: gene Location: 3998-4876 bp Feature: domain Description: TIGR02646 Location: 4211-4664 bp Feature: domain Description: TIGR02 646 Location: 42 11-4664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), TIGR02646 (TIGR02646 family protein)