myRT

myRT report for GCA_000796545.1_AZPAE12135

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Seq: JUAZ01000105.1 (6918 bp)
Overview 1 RT 1: 3996-6917 bp Neighborhood of RT #1 [3996, 6917] RVT-GII GIIM Feature: gene Location: 3996-4175 bp Feature: gene Location: 4359-4757 bp Feature: gene Location: 4907-6175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5120-5777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 20-5777 bp Feature: domain Description: GIIM Note: maturase Location: 5855-6077 bp Feature: domain Description: GIIM Note: maturase Location: 5855-6077 bp Feature: gene Location: 6579-6917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JUAZ01000080.1 (10512 bp)
Overview 1 RT 1: 1937-4497 bp Neighborhood of RT #1 [1937, 4497] Avd_like RVT-DGRs Feature: gene Location: 1937-2293 bp Feature: domain Description: Avd_like Location: 1964-2267 bp Feature: domain Description: Avd_like Location: 1964-2 2 67 bp Feature: gene Location: 2306-2518 bp Feature: gene Location: 2566-3675 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2743-3493 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 743-3493 bp Feature: gene Location: 3780-4085 bp Feature: gene Location: 4120-4497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: JUAZ01000031.1 (143511 bp)
Overview 1 RT 1: 51356-60209 bp 2 RT 2: 76474-86771 bp Neighborhood of RT #1 [51356, 60217] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [76474, 86782] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 51356-52030 bp Feature: domain Description: NTP_transferase_like_1 Location: 51362-52001 bp Feature: domain Description: NTP_transferase_like_1 Location: 513 62-52001 bp Feature: gene Location: 52027-53043 bp Feature: domain Description: COG3178 Location: 52030-53029 bp Feature: domain Description: COG3 178 Location: 5203 0-53 029 bp Feature: gene Location: 54316-56028 bp Feature: RT Description: RVT_N Location: 54373-54616 bp Feature: RT Description: RVT_N Location: 543 73 -54616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54661-55297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54661-55297 bp Feature: domain Description: YkfC Location: 55504-55657 bp Feature: domain Description: YkfC Location: 55504-55657 bp Feature: domain Description: HNH Note: nucleases Location: 55834-55972 bp Feature: domain Description: HNH Note: nucleases Location: 5583 4-55972 bp Feature: gene Location: 56161-58944 bp Feature: domain Description: LptD Location: 56356-58930 bp Feature: domain Description: LptD Location: 563 56-5893 0 bp Feature: gene Location: 59003-60217 bp Feature: domain Description: PRK10770 Location: 59015-60209 bp Feature: domain Description: PRK10770 Location: 59015-60209 bp Feature: gene Location: 76474-78327 bp Feature: domain Description: PRK05658 Location: 76486-78325 bp Feature: domain Description: PRK05658 Location: 76486-783 25 bp Feature: gene Location: 78434-82171 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 78542-79199 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 78542-79199 bp Feature: domain Description: PRK09776 Location: 79412-79883 bp Feature: domain Description: PRK09776 Location: 79412-79883 bp Feature: domain Description: PAS Location: 79940-80465 bp Feature: domain Description: PAS Location: 79940-80465 bp Feature: domain Description: PRK10060 Location: 80474-82121 bp Feature: domain Description: PRK10060 Location: 80474-82121 bp Feature: gene Location: 83252-84937 bp Feature: RT Description: RVT_N Location: 83309-83549 bp Feature: RT Description: RVT_N Location: 83 3 09-83 549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83597-84233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 597-8423 3 bp Feature: domain Description: GIIM Note: maturase Location: 84287-84518 bp Feature: domain Description: GIIM Note: maturase Location: 84287-84518 bp Feature: domain Description: HNH Note: nucleases Location: 84770-84908 bp Feature: domain Description: HNH Note: nucleases Location: 84770-84908 bp Feature: gene Location: 85265-85402 bp Feature: gene Location: 85661-86782 bp Feature: domain Description: COG3177 Location: 85679-86771 bp Feature: domain Description: COG3 177 Location: 85679-86771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )