myRT

myRT report for GCA_000797205.1_AZPAE14712

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Seq: JTWU01000168.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 3-1 235 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTWU01000063.1 (153712 bp)
Overview 1 RT 1: 56678-66986 bp 2 RT 2: 83245-92094 bp Neighborhood of RT #1 [56678, 66988] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [83245, 92123] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 56678-57799 bp Feature: domain Description: COG3177 Location: 56696-57788 bp Feature: domain Description: COG3177 Location: 56696-57788 bp Feature: gene Location: 58061-58222 bp Feature: gene Location: 58525-60210 bp Feature: RT Description: RVT_N Location: 58582-58822 bp Feature: RT Description: RVT_N Location: 58582 -5882 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58870-59506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58870-59506 bp Feature: domain Description: GIIM Note: maturase Location: 59560-59791 bp Feature: domain Description: GIIM Note: maturase Location: 59560-59791 bp Feature: domain Description: HNH Note: nucleases Location: 60043-60181 bp Feature: domain Description: HNH Note: nucleases Location: 60043-60181 bp Feature: gene Location: 61291-65028 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 61399-62056 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 61399-62 056 bp Feature: domain Description: PRK09776 Location: 62269-62740 bp Feature: domain Description: PRK09776 Location: 62 2 69-62 740 bp Feature: domain Description: PAS Location: 62785-63322 bp Feature: domain Description: PAS Location: 62 785-6332 2 bp Feature: domain Description: PRK10060 Location: 63331-64978 bp Feature: domain Description: PRK10060 Location: 63331-64978 bp Feature: gene Location: 65135-66988 bp Feature: domain Description: PRK05658 Location: 65147-66986 bp Feature: domain Description: PRK05658 Location: 65147-66986 bp Feature: gene Location: 83245-84459 bp Feature: domain Description: PRK10770 Location: 83257-84451 bp Feature: domain Description: PRK10770 Location: 832 57-84451 bp Feature: gene Location: 84518-87319 bp Feature: domain Description: LptD Location: 84713-87305 bp Feature: domain Description: LptD Location: 84713-87305 bp Feature: gene Location: 87452-89164 bp Feature: RT Description: RVT_N Location: 87509-87752 bp Feature: RT Description: RVT_N Location: 87509-87752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87797-88430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87797-88430 bp Feature: domain Description: YkfC Location: 88643-88793 bp Feature: domain Description: YkfC Location: 88643-88793 bp Feature: domain Description: HNH Note: nucleases Location: 88970-89108 bp Feature: domain Description: HNH Note: nucleases Location: 88970-89108 bp Feature: gene Location: 90436-91452 bp Feature: domain Description: COG3178 Location: 90439-91438 bp Feature: domain Description: COG3178 Location: 90439-91438 bp Feature: gene Location: 91449-92123 bp Feature: domain Description: NTP_transferase_like_1 Location: 91455-92094 bp Feature: domain Description: NTP_transferase_like_1 Location: 91455-92 094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)