myRT

myRT report for GCA_000797245.1_AZPAE12418

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Seq: JTZW01000014.1 (142893 bp)
Overview 1 RT 1: 49647-58487 bp 2 RT 2: 74751-85048 bp Neighborhood of RT #1 [49647, 58495] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74751, 85059] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49647-50321 bp Feature: domain Description: NTP_transferase_like_1 Location: 49653-50292 bp Feature: domain Description: NTP_transferase_like_1 Location: 49653-50292 bp Feature: gene Location: 50318-51334 bp Feature: domain Description: COG3178 Location: 50321-51320 bp Feature: domain Description: COG31 78 Location: 50321 -51 320 bp Feature: gene Location: 52606-54318 bp Feature: RT Description: RVT_N Location: 52663-52906 bp Feature: RT Description: RVT_N Location: 52663-52906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52951-53587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52951 -53587 bp Feature: domain Description: YkfC Location: 53797-53947 bp Feature: domain Description: YkfC Location: 53797-53947 bp Feature: domain Description: HNH Note: nucleases Location: 54124-54262 bp Feature: domain Description: HNH Note: nucleases Location: 541 24-54262 bp Feature: gene Location: 54451-57222 bp Feature: domain Description: LptD Location: 54646-57208 bp Feature: domain Description: LptD Location: 54646-57208 bp Feature: gene Location: 57281-58495 bp Feature: domain Description: PRK10770 Location: 57293-58487 bp Feature: domain Description: PRK1 0770 Location: 57293-58487 bp Feature: gene Location: 74751-76604 bp Feature: domain Description: PRK05658 Location: 74763-76602 bp Feature: domain Description: PRK05658 Location: 74763-76602 bp Feature: gene Location: 76711-80448 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76819-77476 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 7681 9-77476 bp Feature: domain Description: PRK09776 Location: 77689-78160 bp Feature: domain Description: PRK09776 Location: 77689-781 60 bp Feature: domain Description: PAS Location: 78214-78742 bp Feature: domain Description: PAS Location: 7821 4-78742 bp Feature: domain Description: PRK10060 Location: 78751-80398 bp Feature: domain Description: PRK1 0060 Location: 78751 -80398 bp Feature: gene Location: 81529-83214 bp Feature: RT Description: RVT_N Location: 81586-81826 bp Feature: RT Description: RVT_N Location: 81 586-81 826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81874-82510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 874-8251 0 bp Feature: domain Description: GIIM Note: maturase Location: 82564-82795 bp Feature: domain Description: GIIM Note: maturase Location: 82564-82795 bp Feature: domain Description: HNH Note: nucleases Location: 83047-83185 bp Feature: domain Description: HNH Note: nucleases Location: 83047-831 85 bp Feature: gene Location: 83542-83679 bp Feature: gene Location: 83938-85059 bp Feature: domain Description: COG3177 Location: 83956-85048 bp Feature: domain Description: COG31 77 Location: 83956-85048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )