myRT

myRT report for GCA_000797355.1_AZPAE12423

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Seq: JTZR01000008.1 (143092 bp)
Overview 1 RT 1: 49869-58688 bp 2 RT 2: 74952-85249 bp Neighborhood of RT #1 [49869, 58696] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74952, 85260] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49869-50522 bp Feature: domain Description: NTP_transferase_like_1 Location: 49875-50493 bp Feature: domain Description: NTP_transferase_like_1 Location: 49875-50493 bp Feature: gene Location: 50519-51535 bp Feature: domain Description: COG3178 Location: 50522-51521 bp Feature: domain Description: COG31 78 Location: 50522-51 521 bp Feature: gene Location: 52807-54519 bp Feature: RT Description: RVT_N Location: 52864-53107 bp Feature: RT Description: RVT_N Location: 52864-531 07 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53152-53788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 531 52-53788 bp Feature: domain Description: YkfC Location: 53998-54148 bp Feature: domain Description: YkfC Location: 53998-541 48 bp Feature: domain Description: HNH Note: nucleases Location: 54325-54463 bp Feature: domain Description: HNH Note: nucleases Location: 54325-54463 bp Feature: gene Location: 54652-57423 bp Feature: domain Description: LptD Location: 54847-57409 bp Feature: domain Description: LptD Location: 54847-57409 bp Feature: gene Location: 57482-58696 bp Feature: domain Description: PRK10770 Location: 57494-58688 bp Feature: domain Description: PRK1 0770 Location: 57494-58688 bp Feature: gene Location: 74952-76805 bp Feature: domain Description: PRK05658 Location: 74964-76803 bp Feature: domain Description: PRK05658 Location: 74964-76803 bp Feature: gene Location: 76912-80649 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77020-77677 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77020-77677 bp Feature: domain Description: PRK09776 Location: 77890-78361 bp Feature: domain Description: PRK09776 Location: 77890-78361 bp Feature: domain Description: PAS Location: 78415-78943 bp Feature: domain Description: PAS Location: 7841 5-78943 bp Feature: domain Description: PRK10060 Location: 78952-80599 bp Feature: domain Description: PRK1 0060 Location: 78952-80599 bp Feature: gene Location: 81730-83415 bp Feature: RT Description: RVT_N Location: 81787-82027 bp Feature: RT Description: RVT_N Location: 81 787-82027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82075-82711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82075-8271 1 bp Feature: domain Description: GIIM Note: maturase Location: 82765-82996 bp Feature: domain Description: GIIM Note: maturase Location: 82765-82996 bp Feature: domain Description: HNH Note: nucleases Location: 83248-83386 bp Feature: domain Description: HNH Note: nucleases Location: 83248-83386 bp Feature: gene Location: 83743-83880 bp Feature: gene Location: 84139-85260 bp Feature: domain Description: COG3177 Location: 84157-85249 bp Feature: domain Description: COG31 77 Location: 841 57-85249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )