myRT

myRT report for GCA_000798135.1_Escherichia_coli_CVM_N34054PS_v._1.0

Download annotations/find similar RTs

Seq: JUDA01000164.1 (2416 bp)
Overview 1 RT 1: 203-2105 bp Neighborhood of RT #1 [203, 2105] RVT-GII GIIM Feature: gene Location: 203-1711 bp Ori: KHI48971.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 93 bp Feature: domain Description: GIIM Note: maturase Location: 1268-1466 bp Feature: domain Description: GIIM Note: maturase Location: 1 268-1 466 bp Feature: gene Location: 1680-2105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JUDA01000124.1 (13484 bp)
Overview 1 RT 1: 804-3285 bp Neighborhood of RT #1 [804, 3305] RVT-UG3 PRK09678 Psu Feature: gene Location: 804-2081 bp Ori: KHI50655.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1092-1587 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1092 -1587 bp Feature: gene Location: 2476-2748 bp Ori: KHI50656.1 Feature: domain Description: PRK09678 Location: 2485-2650 bp Feature: domain Description: PRK09678 Location: 2 485-2 650 bp Feature: gene Location: 2754-3305 bp Ori: KHI50657.1 Feature: domain Description: Psu Location: 2775-3285 bp Feature: domain Description: Psu Location: 2 775-32 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)

Seq: JUDA01000042.1 (11501 bp)
Overview 1 RT 1: 6968-11496 bp Neighborhood of RT #1 [6968, 11501] RVT-GII RVT-GII GIIM HTH_LacI PBP1_GntR Feature: gene Location: 6968-7312 bp Feature: gene Location: 7522-7848 bp Feature: gene Location: 8757-9191 bp Ori: KHI57348.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8949-9165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8949-9165 bp Feature: gene Location: 9281-9817 bp Ori: KHI57350.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9287-9575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9287-9575 bp Feature: domain Description: GIIM Note: maturase Location: 9623-9815 bp Feature: domain Description: GIIM Note: maturase Location: 9623 -9815 bp Feature: gene Location: 10542-11501 bp Ori: KHI57351.1 Feature: domain Description: HTH_LacI Location: 10548-10671 bp Feature: domain Description: HTH_LacI Location: 10548-10671 bp Feature: domain Description: PBP1_GntR Location: 10686-11496 bp Feature: domain Description: PBP1_GntR Location: 10686-11496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_LacI (cd01392), PBP1_GntR (cd01575)