myRT

myRT report for GCA_000798455.1_Escherichia_coli_CVM_N36158PS_v._1.0

Download annotations/find similar RTs

Seq: JUCR01000022.1 (147419 bp)
Overview 1 RT 1: 133548-139933 bp Neighborhood of RT #1 [133548, 139933] met_A_Alw26 RVT-GII Feature: gene Location: 133548-135800 bp Ori: KHI09168.1 Feature: domain Description: met_A_Alw26 Location: 133875-135576 bp Feature: domain Description: met_A_Alw26 Location: 1 33875-1 35576 bp Feature: gene Location: 135866-136066 bp Feature: gene Location: 136878-137141 bp Ori: KHI09170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136884-137004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36884-1 37004 bp Feature: gene Location: 137567-138004 bp Feature: gene Location: 139559-139933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT met_A_Alw26 (TIGR02987), RVT-GII

Seq: JUCR01000063.1 (56250 bp)
Overview 1 RT 1: 2728-13667 bp Neighborhood of RT #1 [2728, 13667] Psu RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 2728-3300 bp Ori: KHI04864.1 Feature: domain Description: Psu Location: 2746-3283 bp Feature: domain Description: Psu Location: 2 746-32 83 bp Feature: gene Location: 3603-4343 bp Feature: gene Location: 4340-5968 bp Ori: KHI04866.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4748-5177 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4748-5177 bp Feature: gene Location: 5961-7145 bp Ori: KHI04867.1 Feature: domain Description: PRK09692 Location: 5967-7122 bp Feature: domain Description: PRK09692 Location: 5967-712 2 bp Feature: gene Location: 7854-9035 bp Ori: KHI04868.1 Feature: domain Description: DUF4062 Location: 7869-8196 bp Feature: domain Description: DUF4062 Location: 7869-8196 bp Feature: gene Location: 9066-9527 bp Ori: KHI04869.1 Feature: domain Description: HTH_XRE Location: 9096-9264 bp Feature: domain Description: HTH_XRE Location: 9096-92 64 bp Feature: gene Location: 9767-10264 bp Feature: gene Location: 10401-12107 bp Ori: KHI04870.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10551-11148 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10551-11148 bp Feature: gene Location: 12375-13040 bp Ori: KHI04871.1 Feature: domain Description: Resolvase Location: 12396-12813 bp Feature: domain Description: Resolvase Location: 12 396-12 813 bp Feature: gene Location: 13323-13667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)