myRT

myRT report for GCA_000799595.1_ASM79959v1

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Seq: KN549103.1 Paenibacillus chondroitinus strain OK414 genomic scaffold EW81DRAFT_scaffold00003.3, whole genome shotgun sequence (533094 bp)
Overview 1 RT 1: 273610-279002 bp Neighborhood of RT #1 [273610, 279010] MviM MviM PRK10371 AraC RVT-GII UxaC Feature: gene Location: 273610-274893 bp Feature: domain Description: MviM Location: 273613-274252 bp Feature: domain Description: MviM Location: 27361 3-274252 bp Feature: domain Description: MviM Location: 274444-274729 bp Feature: domain Description: MviM Location: 274444-274729 bp Feature: gene Location: 275065-275886 bp Feature: domain Description: PRK10371 Location: 275104-275230 bp Feature: domain Description: PRK1 0371 Location: 2751 04-275230 bp Feature: domain Description: AraC Location: 275569-275878 bp Feature: domain Description: AraC Location: 275569-275878 bp Feature: gene Location: 276099-276950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276405-276942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276405-276942 bp Feature: gene Location: 277026-277454 bp Feature: gene Location: 277520-279010 bp Feature: domain Description: UxaC Location: 277613-279002 bp Feature: domain Description: UxaC Location: 27761 3-279002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), PRK10371 (transcriptional regulator MelR), AraC (COG2207), RVT-GII, UxaC (pfam02614)

Seq: JUGY01000006.1 Paenibacillus chondroitinus strain OK414 EW81DRAFT_scaffold00005.5_C, whole genome shotgun sequence (357512 bp)
Overview 1 RT 1: 261760-265928 bp Neighborhood of RT #1 [261760, 265928] LysR LysR RVT-GII GIIM Feature: gene Location: 261760-262698 bp Feature: domain Description: LysR Location: 261763-262621 bp Feature: domain Description: LysR Location: 2 61763-2 62 62 1 bp Feature: gene Location: 262695-263618 bp Feature: domain Description: LysR Location: 262716-263604 bp Feature: domain Description: LysR Location: 2 62 716-2 63604 bp Feature: gene Location: 263881-264942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264013-264619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 64013-2 64619 bp Feature: domain Description: GIIM Note: maturase Location: 264664-264865 bp Feature: domain Description: GIIM Note: maturase Location: 2 64664-2 64865 bp Feature: gene Location: 265258-265707 bp Feature: gene Location: 265767-265928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: JUGY01000026.1 Paenibacillus chondroitinus strain OK414 EW81DRAFT_scaffold00024.24_C, whole genome shotgun sequence (107976 bp)
Overview 1 RT 1: 40430-44990 bp Neighborhood of RT #1 [40430, 44990] 2A0309 RVT-GII GIIM Feature: gene Location: 40430-41533 bp Feature: domain Description: 2A0309 Location: 40448-41510 bp Feature: domain Description: 2A03 09 Location: 40448-41510 bp Feature: gene Location: 41553-41786 bp Feature: gene Location: 42300-43601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42606-43239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42606-43 23 9 bp Feature: domain Description: GIIM Note: maturase Location: 43317-43539 bp Feature: domain Description: GIIM Note: maturase Location: 43 3 17-43 53 9 bp Feature: gene Location: 43826-44128 bp Feature: gene Location: 44301-44990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A0309 (TIGR00912), RVT-GII, GIIM (pfam08388)

Seq: KN549105.1 Paenibacillus chondroitinus strain OK414 genomic scaffold EW81DRAFT_scaffold00028.28, whole genome shotgun sequence (92830 bp)
Overview 1 RT 1: 34602-43380 bp Neighborhood of RT #1 [34602, 43415] PRK03612 metH RVT-GII PBP2_TMBP_like Feature: gene Location: 34602-35558 bp Feature: domain Description: PRK03612 Location: 34725-35490 bp Feature: domain Description: PRK03612 Location: 34 725-354 90 bp Feature: gene Location: 35663-39115 bp Feature: domain Description: metH Location: 35696-39095 bp Feature: domain Description: metH Location: 35696-39095 bp Feature: gene Location: 39280-40206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39481-40141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394 81-4 014 1 bp Feature: gene Location: 40710-41825 bp Feature: gene Location: 42063-43415 bp Feature: domain Description: PBP2_TMBP_like Location: 42210-43380 bp Feature: domain Description: PBP2_TMBP_like Location: 4 2210-4 3380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03612 (polyamine aminopropyltransferase), metH (TIGR02082), RVT-GII, PBP2_TMBP_like (cd13585)

Seq: JUGY01000059.1 Paenibacillus chondroitinus strain OK414 EW81DRAFT_scaffold00054.54_C, whole genome shotgun sequence (46726 bp)
Overview 1 RT 1: 35914-39051 bp Neighborhood of RT #1 [35914, 39599] RVT-GII GIIM DEDD_Tnp_IS110 COG1708 Feature: gene Location: 35914-36225 bp Feature: gene Location: 36284-36712 bp Feature: gene Location: 36832-38091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37027-37645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37027-37645 bp Feature: domain Description: GIIM Note: maturase Location: 37699-37906 bp Feature: domain Description: GIIM Note: maturase Location: 37699-37906 bp Feature: gene Location: 38223-38567 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 38292-38559 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 38292-385 5 9 bp Feature: gene Location: 38832-39599 bp Feature: domain Description: COG1708 Location: 38904-39051 bp Feature: domain Description: COG1708 Location: 38904-3905 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), COG1708 (Predicted nucleotidyltransferase )

Seq: JUGY01000097.1 Paenibacillus chondroitinus strain OK414 EW81DRAFT_scaffold00092.92_C, whole genome shotgun sequence (1681 bp)
Overview 1 RT 1: 2-1473 bp Neighborhood of RT #1 [2, 1583] RVT-GII group_II_RT_mat Feature: gene Location: 2-163 bp Feature: gene Location: 191-1282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-1145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-1145 bp Feature: gene Location: 1254-1583 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1263-1473 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 126 3-1473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII