myRT

myRT report for GCA_000799925.1_ASM79992v1

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Seq: JUHQ01000010.1 Rhizobium tropici strain YR635 EX16DRAFT_scaffold00007.7_C, whole genome shotgun sequence (342892 bp)
Overview 1 RT 1: 293084-298484 bp Neighborhood of RT #1 [293084, 298492] Dabb RVT-Retrons Trypsin_2 HATPase_c_3 rnhA Feature: gene Location: 293084-293353 bp Feature: domain Description: Dabb Location: 293090-293345 bp Feature: domain Description: Dabb Location: 293090-293345 bp Feature: gene Location: 293440-293679 bp Feature: gene Location: 293778-295442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 293904-294540 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 293904-294540 bp Feature: domain Description: Trypsin_2 Location: 294927-295362 bp Feature: domain Description: Trypsin_2 Location: 294927-295362 bp Feature: gene Location: 295740-297776 bp Feature: domain Description: HATPase_c_3 Location: 295815-296151 bp Feature: domain Description: HATPase_c_3 Location: 29581 5-2961 51 bp Feature: gene Location: 298052-298492 bp Feature: domain Description: rnhA Location: 298055-298484 bp Feature: domain Description: rnhA Location: 298055-298484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dabb (smart00886), RVT-Retrons, Trypsin_2 (pfam13365), HATPase_c_3 (pfam13589), rnhA (PRK13907)

Seq: JUHQ01000021.1 Rhizobium tropici strain YR635 EX16DRAFT_scaffold00018.18_C, whole genome shotgun sequence (125989 bp)
Overview 1 RT 1: 34203-40066 bp Neighborhood of RT #1 [34203, 40107] DUF3396 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII dha_L_ycgS Feature: gene Location: 34203-35225 bp Feature: domain Description: DUF3396 Location: 34587-35220 bp Feature: domain Description: DUF3396 Location: 34587-352 2 0 bp Feature: gene Location: 35531-36922 bp Feature: domain Description: zf-IS66 Location: 35708-35831 bp Feature: domain Description: zf-IS66 Location: 35708-35831 bp Feature: domain Description: DDE_Tnp_IS66 Location: 35894-36761 bp Feature: domain Description: DDE_Tnp_IS66 Location: 35894-36761 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 36782-36893 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 36782 -36893 bp Feature: gene Location: 37029-38852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37767-38457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37767-38457 bp Feature: gene Location: 39068-39418 bp Feature: gene Location: 39445-40107 bp Feature: domain Description: dha_L_ycgS Location: 39484-40066 bp Feature: domain Description: dha_L_ycgS Location: 39484-40066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3396 (pfam11876), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, dha_L_ycgS (TIGR02365)