myRT

myRT report for GCA_000801405.1_L_monocytogenes_SHL001_v1.0

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Seq: APIB01000001.1 Listeria monocytogenes SHL001 contig1, whole genome shotgun sequence (783694 bp)
Overview 1 RT 1: 193231-200203 bp Neighborhood of RT #1 [193231, 200385] SpoT Cah RVT-Retrons Peptidases_S8_Subtilisin_like_2 SpoVK Feature: gene Location: 193231-193773 bp Ori: KHK13270.1 Feature: domain Description: SpoT Location: 193237-193765 bp Feature: domain Description: SpoT Location: 1 93237-1 93765 bp Feature: gene Location: 193841-194542 bp Ori: KHK13271.1 Feature: domain Description: Cah Location: 193853-194537 bp Feature: domain Description: Cah Location: 1 93853-1 94537 bp Feature: gene Location: 194706-196397 bp Ori: KHK13272.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194832-195432 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 94832-1 95432 bp Feature: gene Location: 196953-199289 bp Ori: KHK13273.1 Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 197706-198519 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 1 97706-1 9851 9 bp Feature: gene Location: 199291-200385 bp Ori: KHK13274.1 Feature: domain Description: SpoVK Location: 199561-200203 bp Feature: domain Description: SpoVK Location: 1 99561 -200203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoT (COG0317), Cah (COG3338), RVT-Retrons, Peptidases_S8_Subtilisin_like_2 (cd04847), SpoVK (COG0464)

Seq: APIB01000016.1 Listeria monocytogenes SHL001 contig16, whole genome shotgun sequence (1860 bp)
Overview 1 RT 1: 235-1535 bp Neighborhood of RT #1 [235, 1535] RVT-GII Feature: gene Location: 235-1281 bp Ori: KHK05566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 41-694 bp Feature: gene Location: 1278-1535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII