myRT

myRT report for GCA_000801735.1_ZNC0007.1

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Seq: JRQK01000032.1 Comamonas testosteroni ZNC0007 L994_32, whole genome shotgun sequence (53894 bp)
Overview 1 RT 1: 39026-44724 bp Neighborhood of RT #1 [39026, 44724] PRK10867 RVT-GII GIIM HNHc YpjD Feature: gene Location: 39026-40543 bp Feature: domain Description: PRK10867 Location: 39155-40484 bp Feature: domain Description: PRK1 0867 Location: 391 55-40484 bp Feature: gene Location: 40438-40779 bp Feature: gene Location: 42237-43553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42240-42828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42240-42828 bp Feature: domain Description: GIIM Note: maturase Location: 42879-43113 bp Feature: domain Description: GIIM Note: maturase Location: 42879-431 1 3 bp Feature: domain Description: HNHc Note: nucleases Location: 43317-43494 bp Feature: domain Description: HNHc Note: nucleases Location: 4331 7-43494 bp Feature: gene Location: 43601-44482 bp Feature: domain Description: YpjD Location: 43727-44471 bp Feature: domain Description: YpjD Location: 43727-44471 bp Feature: gene Location: 44479-44724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10867 (signal recognition particle protein; Provisional), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YpjD (COG4137)

Seq: JRQK01000058.1 Comamonas testosteroni ZNC0007 L994_58, whole genome shotgun sequence (19852 bp)
Overview 1 RT 1: 17791-19394 bp Neighborhood of RT #1 [17791, 19801] RVT-UG7 Feature: gene Location: 17791-18012 bp Feature: gene Location: 18228-18410 bp Feature: gene Location: 18557-19801 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18974-19394 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18974-19394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: JRQK01000089.1 Comamonas testosteroni ZNC0007 L994_90, whole genome shotgun sequence (7549 bp)
Overview 1 RT 1: 3283-7504 bp Neighborhood of RT #1 [3283, 7548] PRK10700 ScpB RVT-GII GIIM HNHc Feature: gene Location: 3283-4872 bp Feature: domain Description: PRK10700 Location: 3769-4495 bp Feature: domain Description: PRK10700 Location: 3 769-4495 bp Feature: gene Location: 4869-6023 bp Feature: domain Description: ScpB Location: 4884-5394 bp Feature: domain Description: ScpB Location: 4884-53 94 bp Feature: gene Location: 6268-7548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6277-6841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6277-6841 bp Feature: domain Description: GIIM Note: maturase Location: 6892-7126 bp Feature: domain Description: GIIM Note: maturase Location: 6892-7126 bp Feature: domain Description: HNHc Note: nucleases Location: 7354-7504 bp Feature: domain Description: HNHc Note: nucleases Location: 73 54-7504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10700 (23S rRNA pseudouridine(2605) synthase RluB), ScpB (COG1386), RVT-GII, GIIM (pfam08388), HNHc (smart00507)