myRT

myRT report for GCA_000801815.1_PfAU6308

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Seq: JRXZ01000015.1 Pseudomonas fluorescens strain AU6308 Scaffold_170, whole genome shotgun sequence (660357 bp)
Overview 1 RT 1: 126388-129558 bp 2 RT 2: 488461-493703 bp Neighborhood of RT #1 [126388, 129558] Avd_like RVT-DGRs Neighborhood of RT #2 [488461, 493732] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 126388-126981 bp Feature: gene Location: 127040-127393 bp Feature: domain Description: Avd_like Location: 127067-127373 bp Feature: domain Description: Avd_like Location: 1 27067-1 27373 bp Feature: gene Location: 127606-128763 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 127855-128611 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 27855-1 2861 1 bp Feature: gene Location: 128805-129254 bp Feature: gene Location: 129319-129558 bp Feature: gene Location: 488461-489423 bp Feature: domain Description: ACR3 Location: 488476-489403 bp Feature: domain Description: ACR3 Location: 488476-489403 bp Feature: gene Location: 489462-489596 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 489468-489579 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 489468-489579 bp Feature: gene Location: 489788-491449 bp Feature: RT Description: RVT_N Location: 489833-490076 bp Feature: RT Description: RVT_N Location: 489833-490076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490121-490757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4901 21 -490757 bp Feature: domain Description: GIIM Note: maturase Location: 490814-491042 bp Feature: domain Description: GIIM Note: maturase Location: 49081 4-491 042 bp Feature: gene Location: 492007-493335 bp Feature: domain Description: LZ_Tnp_IS66 Location: 492139-492346 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4921 39-492346 bp Feature: domain Description: zf-IS66 Location: 492385-492499 bp Feature: domain Description: zf-IS66 Location: 492385-492499 bp Feature: domain Description: DDE_Tnp_IS66 Location: 492541-493315 bp Feature: domain Description: DDE_Tnp_IS66 Location: 492541 -49331 5 bp Feature: gene Location: 493397-493732 bp Feature: domain Description: TnpB_IS66 Location: 493415-493703 bp Feature: domain Description: TnpB_IS66 Location: 49341 5-493703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)
TnpB_IS66 (pfam05717)

Seq: JRXZ01000016.1 Pseudomonas fluorescens strain AU6308 Scaffold_220, whole genome shotgun sequence (248177 bp)
Overview 1 RT 1: 168152-174036 bp Neighborhood of RT #1 [168152, 174056] RVT-GII GlxA MFS_ProP Feature: gene Location: 168152-168301 bp Feature: gene Location: 168893-169060 bp Feature: gene Location: 169171-170937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169855-170545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169855-170545 bp Feature: gene Location: 171664-172683 bp Feature: domain Description: GlxA Location: 171730-172669 bp Feature: domain Description: GlxA Location: 171730-172 669 bp Feature: gene Location: 172770-174056 bp Feature: domain Description: MFS_ProP Location: 172809-174036 bp Feature: domain Description: MFS_ProP Location: 172 809-174036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GlxA (COG4977), MFS_ProP (cd17366)