myRT

myRT report for GCA_000801855.1_PfAU11518

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Seq: JRXW01000024.1 Pseudomonas fluorescens strain AU11518 Scaffold_130, whole genome shotgun sequence (206045 bp)
Overview 1 RT 1: 1-3137 bp Neighborhood of RT #1 [1, 3640] RVT-GII InsE rve Feature: gene Location: 1-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-907 bp Feature: gene Location: 1064-1327 bp Feature: domain Description: InsE Location: 1073-1226 bp Feature: domain Description: InsE Location: 1 073-1 226 bp Feature: gene Location: 1925-3640 bp Feature: domain Description: rve Location: 2717-3137 bp Feature: domain Description: rve Location: 271 7-31 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963), rve (pfam00665)

Seq: JRXW01000031.1 Pseudomonas fluorescens strain AU11518 Scaffold_160, whole genome shotgun sequence (60138 bp)
Overview 1 RT 1: 2782-8241 bp Neighborhood of RT #1 [2782, 8387] HTH_ARSR RVT-UG1 DUF3800 Feature: gene Location: 2782-3372 bp Feature: domain Description: HTH_ARSR Location: 2956-3082 bp Feature: domain Description: HTH_ARSR Location: 2 956-3082 bp Feature: gene Location: 3490-3852 bp Feature: gene Location: 3813-6029 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4485-5022 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4485-502 2 bp Feature: gene Location: 6145-7683 bp Feature: gene Location: 7680-8387 bp Feature: domain Description: DUF3800 Location: 7698-8241 bp Feature: domain Description: DUF3800 Location: 7698-82 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-UG1, DUF3800 (pfam12686)

Seq: JRXW01000001.1 Pseudomonas fluorescens strain AU11518 Scaffold_230, whole genome shotgun sequence (254435 bp)
Overview 1 RT 1: 106358-108995 bp Neighborhood of RT #1 [106358, 108995] RVT-GII GIIM Feature: gene Location: 106358-106582 bp Feature: gene Location: 106597-106803 bp Feature: gene Location: 106982-108403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107339-107954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073 3 9-107954 bp Feature: domain Description: GIIM Note: maturase Location: 108011-108236 bp Feature: domain Description: GIIM Note: maturase Location: 108011-10823 6 bp Feature: gene Location: 108538-108723 bp Feature: gene Location: 108867-108995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)