myRT

myRT report for GCA_000806475.1_CFSAN024721_01.0

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Seq: JWRB01000018.1 (49875 bp)
Overview 1 RT 1: 44760-49666 bp Neighborhood of RT #1 [44760, 49666] PRK10216 PRK10473 RVT-Retrons Feature: gene Location: 44760-45719 bp Feature: domain Description: PRK10216 Location: 44763-45714 bp Feature: domain Description: PRK1 021 6 Location: 44763-4571 4 bp Feature: gene Location: 45688-46875 bp Feature: domain Description: PRK10473 Location: 45691-46867 bp Feature: domain Description: PRK1 0473 Location: 45691 -46867 bp Feature: gene Location: 47769-48704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47880-48465 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47880-48465 bp Feature: gene Location: 48704-49666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: JWRB01000017.1 (13209 bp)
Overview 1 RT 1: 3915-8481 bp Neighborhood of RT #1 [3915, 8597] PRK11352 PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 3915-4223 bp Feature: domain Description: PRK11352 Location: 4080-4221 bp Feature: domain Description: PRK11352 Location: 4080-42 2 1 bp Feature: gene Location: 4439-4864 bp Feature: domain Description: PHA02517 Location: 4460-4799 bp Feature: domain Description: PHA02 517 Location: 4460-4799 bp Feature: gene Location: 5471-6979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5729-6461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 572 9-6461 bp Feature: domain Description: GIIM Note: maturase Location: 6536-6734 bp Feature: domain Description: GIIM Note: maturase Location: 6536-6734 bp Feature: gene Location: 7054-7302 bp Feature: domain Description: PHA02517 Location: 7063-7267 bp Feature: domain Description: PHA02 517 Location: 7063-72 67 bp Feature: gene Location: 7521-8597 bp Feature: domain Description: COG3547 Location: 7560-8481 bp Feature: domain Description: COG3547 Location: 7560-8481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11352 (formaldehyde-responsive transcriptional repressor FrmR), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )