myRT

myRT report for GCA_000807495.2_ASM80749v2

Download annotations/find similar RTs

Seq: JWRL01000012.1 Klebsiella pneumoniae strain 38547 contig12, whole genome shotgun sequence (493824 bp)
Overview 1 RT 1: 337929-343347 bp Neighborhood of RT #1 [337929, 343349] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 337929-339068 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 338112-339012 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3381 1 2-33901 2 bp Feature: gene Location: 339239-339481 bp Feature: domain Description: DinI Location: 339290-339470 bp Feature: domain Description: DinI Location: 339290-339470 bp Feature: gene Location: 340099-341583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340501-341191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340501 -341 1 91 bp Feature: gene Location: 341662-342081 bp Feature: domain Description: PRK10276 Location: 341665-342076 bp Feature: domain Description: PRK1 0276 Location: 341 665-342076 bp Feature: gene Location: 342084-343349 bp Feature: domain Description: umuC Location: 342087-343347 bp Feature: domain Description: umuC Location: 342087-343347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: JWRL01000002.1 Klebsiella pneumoniae strain 38547 contig2, whole genome shotgun sequence (18609 bp)
Overview 1 RT 1: 11991-18434 bp Neighborhood of RT #1 [11991, 18484] DDE_Tnp_1_5 DDE_Tnp_IS1 RVT-GII int Feature: gene Location: 11991-12914 bp Feature: domain Description: DDE_Tnp_1_5 Location: 12048-12381 bp Feature: domain Description: DDE_Tnp_1_5 Location: 12 048-12 381 bp Feature: gene Location: 14680-15183 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14791-15181 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14791-15181 bp Feature: gene Location: 15529-17013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15931-16621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15931-1662 1 bp Feature: gene Location: 17432-18484 bp Feature: domain Description: int Location: 17435-18434 bp Feature: domain Description: int Location: 17435-18434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), DDE_Tnp_IS1 (pfam03400), RVT-GII, int (PHA02601)

Seq: JWRL01000009.1 Klebsiella pneumoniae strain 38547 contig9, whole genome shotgun sequence (1255699 bp)
Overview 1 RT 1: 1221932-1228415 bp Neighborhood of RT #1 [1221932, 1228417] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1221932-1222990 bp Feature: domain Description: YccC Location: 1221938-1222976 bp Feature: domain Description: YccC Location: 122193 8-1222976 bp Feature: gene Location: 1223089-1223562 bp Feature: domain Description: PRK10016 Location: 1223092-1223551 bp Feature: domain Description: PRK10016 Location: 1223 092-1223 551 bp Feature: gene Location: 1223644-1225128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224046-1224736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224046-122473 6 bp Feature: gene Location: 1225649-1226812 bp Feature: domain Description: dacD Location: 1225652-1226807 bp Feature: domain Description: dacD Location: 1225652-1226807 bp Feature: gene Location: 1226993-1228417 bp Feature: domain Description: SbcB Location: 1226999-1228415 bp Feature: domain Description: SbcB Location: 1226999-1228415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: JWRL01000008.1 Klebsiella pneumoniae strain 38547 contig8, whole genome shotgun sequence (115461 bp)
Overview 1 RT 1: 31132-36997 bp Neighborhood of RT #1 [31132, 36999] Rve XerC RVT-GII PRK10276 umuC Feature: gene Location: 31132-31836 bp Feature: domain Description: Rve Location: 31135-31780 bp Feature: domain Description: Rve Location: 31135-31780 bp Feature: gene Location: 32429-32851 bp Feature: domain Description: XerC Location: 32465-32810 bp Feature: domain Description: XerC Location: 324 65-32810 bp Feature: gene Location: 33749-35233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34151-34841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 151-34 84 1 bp Feature: gene Location: 35313-35732 bp Feature: domain Description: PRK10276 Location: 35316-35727 bp Feature: domain Description: PRK10276 Location: 35316-35727 bp Feature: gene Location: 35734-36999 bp Feature: domain Description: umuC Location: 35737-36997 bp Feature: domain Description: umuC Location: 35737-36997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), XerC (COG4973), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)