myRT

myRT report for GCA_000808145.1_ASM80814v1

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Seq: JUJD01000007.1 Pectobacterium carotovorum subsp. brasiliense strain Y62 Y62.scaffold7, whole genome shotgun sequence (816391 bp)
Overview 1 RT 1: 245505-249725 bp Neighborhood of RT #1 [245505, 249727] PRK13501 AAA_21 RVT-Retrons YoeB_toxin PRK11409 Feature: gene Location: 245505-246359 bp Ori: KHS70005.1 Feature: domain Description: PRK13501 Location: 245526-246351 bp Feature: domain Description: PRK1 3501 Location: 245526-246351 bp Feature: gene Location: 246553-247881 bp Ori: KHS70006.1 Feature: domain Description: AAA_21 Location: 246652-247288 bp Feature: domain Description: AAA_21 Location: 246652-247288 bp Feature: gene Location: 247878-248849 bp Ori: KHS70007.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 248010-248577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24801 0-248577 bp Feature: gene Location: 249225-249479 bp Ori: KHS70008.1 Feature: domain Description: YoeB_toxin Location: 249240-249477 bp Feature: domain Description: YoeB_toxin Location: 249240-249477 bp Feature: gene Location: 249476-249727 bp Ori: KHS70009.1 Feature: domain Description: PRK11409 Location: 249479-249725 bp Feature: domain Description: PRK1 1 409 Location: 249479-249725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13501 (HTH-type transcriptional activator RhaR), AAA_21 (pfam13304), RVT-Retrons, YoeB_toxin (pfam06769), PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM)