myRT

myRT report for GCA_000808235.1_ASM80823v1

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Seq: JUJJ01000008.1 Pectobacterium carotovorum subsp. brasiliense strain Y21 Y21.scaffold8, whole genome shotgun sequence (864246 bp)
Overview 1 RT 1: 425918-431094 bp Neighborhood of RT #1 [425918, 431096] Dam Dam PRK05318 RVT-UG17 SLATT_5 PRK13708 Feature: gene Location: 425918-426589 bp Ori: KHS97027.1 Feature: domain Description: Dam Location: 425921-426092 bp Feature: domain Description: Dam Location: 425921 -426092 bp Feature: domain Description: Dam Location: 426167-426377 bp Feature: domain Description: Dam Location: 4261 67-426377 bp Feature: gene Location: 426959-428332 bp Ori: KHS97028.1 Feature: domain Description: PRK05318 Location: 426977-428297 bp Feature: domain Description: PRK0531 8 Location: 426977-428297 bp Feature: gene Location: 428498-429871 bp Ori: KHS97029.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 428729-429335 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 428729-429335 bp Feature: gene Location: 429864-430403 bp Ori: KHS97030.1 Feature: domain Description: SLATT_5 Location: 429870-430389 bp Feature: domain Description: SLATT_5 Location: 429870-430389 bp Feature: gene Location: 430791-431096 bp Ori: KHS97031.1 Feature: domain Description: PRK13708 Location: 430794-431094 bp Feature: domain Description: PRK1 3708 Location: 430794-431 094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), RVT-UG17, SLATT_5 (pfam18160), PRK13708 (type II toxin-antitoxin system toxin CcdB)

Seq: JUJJ01000003.1 Pectobacterium carotovorum subsp. brasiliense strain Y21 Y21.scaffold3, whole genome shotgun sequence (385890 bp)
Overview 1 RT 1: 346038-353948 bp Neighborhood of RT #1 [346038, 353989] VI_effect_Hcp1 HTH_35 RVT-UG5 PRK10403 PRK10935 Feature: gene Location: 346038-346556 bp Ori: KHT00433.1 Feature: domain Description: VI_effect_Hcp1 Location: 346047-346542 bp Feature: domain Description: VI_effect_Hcp1 Location: 346047-346542 bp Feature: gene Location: 347173-347427 bp Ori: KHT00434.1 Feature: domain Description: HTH_35 Location: 347194-347413 bp Feature: domain Description: HTH_35 Location: 347194-347413 bp Feature: gene Location: 348415-351369 bp Ori: KHT00435.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 348910-349378 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 348910-349378 bp Feature: gene Location: 351552-352184 bp Ori: KHT00436.1 Feature: domain Description: PRK10403 Location: 351555-352182 bp Feature: domain Description: PRK10403 Location: 351555-352 182 bp Feature: gene Location: 352271-353989 bp Ori: KHT00437.1 Feature: domain Description: PRK10935 Location: 352274-353948 bp Feature: domain Description: PRK10935 Location: 352 2 74-353948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VI_effect_Hcp1 (TIGR03344), HTH_35 (pfam13693), RVT-UG5, PRK10403 (nitrate/nitrite response regulator protein NarP), PRK10935 (nitrate/nitrite two-component system sensor histidine kinase NarQ)