myRT

myRT report for GCA_000808455.1_ASM80845v1

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Seq: JUJP01000003.1 Pectobacterium carotovorum subsp. brasiliense strain Y60 Y60.scaffold3, whole genome shotgun sequence (779836 bp)
Overview 1 RT 1: 191223-196315 bp Neighborhood of RT #1 [191223, 196315] ParE COG3905 RVT-UG2 COG5519 Feature: gene Location: 191223-191507 bp Ori: KHT18876.1 Feature: domain Description: ParE Location: 191229-191502 bp Feature: domain Description: ParE Location: 1 91 229-1 91 502 bp Feature: gene Location: 191497-191742 bp Ori: KHT18877.1 Feature: domain Description: COG3905 Location: 191500-191716 bp Feature: domain Description: COG3905 Location: 1 91 500-1 91 71 6 bp Feature: gene Location: 192034-193320 bp Ori: KHT18878.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 192235-193027 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 92235-1 93027 bp Feature: gene Location: 194405-194947 bp Ori: KHT18879.1 Feature: domain Description: COG5519 Location: 194417-194942 bp Feature: domain Description: COG551 9 Location: 1 9441 7-1 94942 bp Feature: gene Location: 195446-196315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG2, COG5519 (Uncharcterized protein, DUF927 family )

Seq: JUJP01000006.1 Pectobacterium carotovorum subsp. brasiliense strain Y60 Y60.scaffold6, whole genome shotgun sequence (317220 bp)
Overview 1 RT 1: 274594-285098 bp Neighborhood of RT #1 [274594, 285098] Mod Mod COG3587 RVT-Retrons Feature: gene Location: 274594-276543 bp Ori: KHT17271.1 Feature: domain Description: Mod Location: 274822-275317 bp Feature: domain Description: Mod Location: 2 7482 2 -2 75317 bp Feature: domain Description: Mod Location: 275593-276016 bp Feature: domain Description: Mod Location: 2 75593-2 76016 bp Feature: gene Location: 276543-279527 bp Ori: KHT17222.1 Feature: domain Description: COG3587 Location: 276576-279495 bp Feature: domain Description: COG3587 Location: 2 76576-2 79495 bp Feature: gene Location: 280960-282150 bp Ori: KHT17223.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 281107-281680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 81107-2 81680 bp Feature: gene Location: 282173-282850 bp Feature: gene Location: 283302-285098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mod (COG2189), COG3587 (Restriction endonuclease ), RVT-Retrons