myRT

myRT report for GCA_000812255.1_ASM81225v1

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Seq: JWKC01000168.1 (5478 bp)
Overview 1 RT 1: 119-2244 bp Neighborhood of RT #1 [119, 2244] RVT-GII Feature: gene Location: 119-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-1 21 4 bp Feature: gene Location: 1612-1779 bp Feature: gene Location: 1975-2244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JWKC01000139.1 (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JWKC01000058.1 (104158 bp)
Overview 1 RT 1: 78761-84236 bp Neighborhood of RT #1 [78761, 84280] Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 Pox_D5 COG3943 Feature: gene Location: 78761-81094 bp Feature: domain Description: Prim_Zn_Ribbon Location: 78851-78959 bp Feature: domain Description: Prim_Zn_Ribbon Location: 78851-78959 bp Feature: domain Description: COG3378 Location: 79571-81083 bp Feature: domain Description: COG3 3 78 Location: 79571-81083 bp Feature: gene Location: 81371-81505 bp Feature: gene Location: 81681-83312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 81996-82593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 81996-82593 bp Feature: domain Description: TIR_2 Location: 82917-83274 bp Feature: domain Description: TIR_2 Location: 82917-83 274 bp Feature: gene Location: 83550-83702 bp Feature: domain Description: Pox_D5 Location: 83553-83676 bp Feature: domain Description: Pox_D5 Location: 83 553 -83 676 bp Feature: gene Location: 84134-84280 bp Feature: domain Description: COG3943 Location: 84137-84236 bp Feature: domain Description: COG3 943 Location: 8413 7-8423 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288), COG3943 (Uncharacterized conserved protein )