myRT

myRT report for GCA_000815565.1_ASM81556v1

Download annotations/find similar RTs

Seq: AMJT01000111.1 Shigella flexneri S6585 S6585_112, whole genome shotgun sequence (16332 bp)
Overview 1 RT 1: 7443-14578 bp Neighborhood of RT #1 [7443, 14643] ESPR Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 7443-11561 bp Feature: domain Description: ESPR Location: 7446-7515 bp Feature: domain Description: ESPR Location: 7446-751 5 bp Feature: domain Description: Peptidase_S6 Location: 7596-9768 bp Feature: domain Description: Peptidase_S6 Location: 7596-9768 bp Feature: domain Description: autotrans_barl Location: 10332-11559 bp Feature: domain Description: autotrans_barl Location: 1 0332-1 1 559 bp Feature: gene Location: 11726-12112 bp Feature: domain Description: PHA02517 Location: 11729-12110 bp Feature: domain Description: PHA0251 7 Location: 1 1 729-1 21 1 0 bp Feature: gene Location: 12289-13812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12562-13294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2562-1 3294 bp Feature: domain Description: GIIM Note: maturase Location: 13369-13567 bp Feature: domain Description: GIIM Note: maturase Location: 1 3369-1 3567 bp Feature: gene Location: 13766-14191 bp Feature: gene Location: 14404-14643 bp Feature: domain Description: PHA02517 Location: 14407-14578 bp Feature: domain Description: PHA0251 7 Location: 1 4407-1 4578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: AMJT01000033.1 Shigella flexneri S6585 S6585_34, whole genome shotgun sequence (21900 bp)
Overview 1 RT 1: 7969-10670 bp Neighborhood of RT #1 [7969, 10690] GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 7969-8124 bp Feature: gene Location: 8150-8521 bp Feature: domain Description: GIIM Note: maturase Location: 8228-8447 bp Feature: domain Description: GIIM Note: maturase Location: 82 2 8-8447 bp Feature: gene Location: 8529-9332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8829-9324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 9-932 4 bp Feature: gene Location: 9345-9545 bp Feature: domain Description: Tra5 Location: 9354-9528 bp Feature: domain Description: Tra5 Location: 9354-952 8 bp Feature: gene Location: 9941-10690 bp Feature: domain Description: PAP2_acid_phosphatase Location: 10016-10670 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 10016-10670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)

Seq: AMJT01000008.1 Shigella flexneri S6585 S6585_9, whole genome shotgun sequence (21595 bp)
Overview 1 RT 1: 14179-16832 bp Neighborhood of RT #1 [14179, 16832] COG3547 RVT-GII GIIM Feature: gene Location: 14179-14664 bp Feature: domain Description: COG3547 Location: 14197-14650 bp Feature: domain Description: COG3 547 Location: 14197-14650 bp Feature: gene Location: 14760-14927 bp Feature: gene Location: 14953-16170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15139-15793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513 9-15793 bp Feature: domain Description: GIIM Note: maturase Location: 15871-16093 bp Feature: domain Description: GIIM Note: maturase Location: 15871-16093 bp Feature: gene Location: 16181-16564 bp Feature: gene Location: 16638-16832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)