myRT

myRT report for GCA_000815625.1_ASM81562v1

Download annotations/find similar RTs

Seq: AMJW01000133.1 Shigella flexneri S6764 S6764_134, whole genome shotgun sequence (15631 bp)
Overview 1 RT 1: 8336-10990 bp Neighborhood of RT #1 [8336, 10990] COG3547 RVT-GII GIIM Feature: gene Location: 8336-8821 bp Feature: domain Description: COG3547 Location: 8354-8807 bp Feature: domain Description: COG3547 Location: 8354-8807 bp Feature: gene Location: 8917-9084 bp Feature: gene Location: 9110-10327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9296-9950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9296-9950 bp Feature: domain Description: GIIM Note: maturase Location: 10028-10250 bp Feature: domain Description: GIIM Note: maturase Location: 1 0028-1 0250 bp Feature: gene Location: 10338-10757 bp Feature: gene Location: 10796-10990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: AMJW01000021.1 Shigella flexneri S6764 S6764_22, whole genome shotgun sequence (7983 bp)
Overview 1 RT 1: 6131-7690 bp Neighborhood of RT #1 [6131, 7707] GIIM RVT-GII Tra5 Feature: gene Location: 6131-6286 bp Feature: gene Location: 6312-6683 bp Feature: domain Description: GIIM Note: maturase Location: 6390-6609 bp Feature: domain Description: GIIM Note: maturase Location: 6390-6609 bp Feature: gene Location: 6691-7494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6991-7486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6991-7486 bp Feature: gene Location: 7507-7707 bp Feature: domain Description: Tra5 Location: 7516-7690 bp Feature: domain Description: Tra5 Location: 7516-7690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801)

Seq: AMJW01000070.1 Shigella flexneri S6764 S6764_71, whole genome shotgun sequence (2294 bp)
Overview 1 RT 1: 115-2291 bp Neighborhood of RT #1 [115, 2291] RVT-GII GIIM Feature: gene Location: 115-1638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 88-1120 bp Feature: domain Description: GIIM Note: maturase Location: 1195-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1195-13 93 bp Feature: gene Location: 1932-2291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)