myRT

myRT report for GCA_000815705.1_ASM81570v1

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Seq: AMKA01000010.1 Shigella boydii 08-0280 SB_08_0280_11, whole genome shotgun sequence (35830 bp)
Overview 1 RT 1: 5356-8672 bp Neighborhood of RT #1 [5356, 8674] PAP2_acid_phosphatase Tra5 RVT-GII InsE PHA02517 Feature: gene Location: 5356-6105 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5431-6085 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5431 -6085 bp Feature: gene Location: 6480-6701 bp Feature: domain Description: Tra5 Location: 6492-6684 bp Feature: domain Description: Tra5 Location: 6492-6684 bp Feature: gene Location: 6714-7409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7014-7407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701 4-7407 bp Feature: gene Location: 7461-7787 bp Feature: domain Description: InsE Location: 7464-7785 bp Feature: domain Description: InsE Location: 7464-7785 bp Feature: gene Location: 8027-8674 bp Feature: domain Description: PHA02517 Location: 8030-8672 bp Feature: domain Description: PHA0251 7 Location: 8030-8672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AMKA01000002.1 Shigella boydii 08-0280 SB_08_0280_3, whole genome shotgun sequence (29708 bp)
Overview 1 RT 1: 4542-7196 bp Neighborhood of RT #1 [4542, 7196] COG3547 RVT-GII GIIM Feature: gene Location: 4542-5027 bp Feature: domain Description: COG3547 Location: 4560-5013 bp Feature: domain Description: COG3547 Location: 4560-5013 bp Feature: gene Location: 5123-5290 bp Feature: gene Location: 5316-6533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5502-6156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5502 -6156 bp Feature: domain Description: GIIM Note: maturase Location: 6234-6456 bp Feature: domain Description: GIIM Note: maturase Location: 62 34-6456 bp Feature: gene Location: 6544-6963 bp Feature: gene Location: 7002-7196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)