myRT

myRT report for GCA_000815765.1_ASM81576v1

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Seq: AMKD01000003.1 Shigella boydii 08-6341 SB_08_6431_4, whole genome shotgun sequence (8495 bp)
Overview 1 RT 1: 4531-7185 bp Neighborhood of RT #1 [4531, 7185] COG3547 RVT-GII GIIM Feature: gene Location: 4531-5016 bp Feature: domain Description: COG3547 Location: 4549-5002 bp Feature: domain Description: COG3547 Location: 4549-5002 bp Feature: gene Location: 5112-5279 bp Feature: gene Location: 5305-6522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5491-6145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5491 -61 45 bp Feature: domain Description: GIIM Note: maturase Location: 6223-6445 bp Feature: domain Description: GIIM Note: maturase Location: 6223-6445 bp Feature: gene Location: 6533-6952 bp Feature: gene Location: 6991-7185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: AMKD01000008.1 Shigella boydii 08-6341 SB_08_6431_9, whole genome shotgun sequence (46585 bp)
Overview 1 RT 1: 10278-13594 bp Neighborhood of RT #1 [10278, 13596] PAP2_acid_phosphatase Tra5 RVT-GII InsE PHA02517 Feature: gene Location: 10278-11027 bp Feature: domain Description: PAP2_acid_phosphatase Location: 10353-11007 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 10353-11007 bp Feature: gene Location: 11402-11623 bp Feature: domain Description: Tra5 Location: 11414-11606 bp Feature: domain Description: Tra5 Location: 11414-11606 bp Feature: gene Location: 11636-12331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11936-12329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11936-12 32 9 bp Feature: gene Location: 12383-12709 bp Feature: domain Description: InsE Location: 12386-12707 bp Feature: domain Description: InsE Location: 12 386-12 707 bp Feature: gene Location: 12709-13596 bp Feature: domain Description: PHA02517 Location: 12769-13594 bp Feature: domain Description: PHA02 517 Location: 12 769-13594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)