myRT

myRT report for GCA_000815945.1_ASM81594v1

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Seq: ANAN01000067.1 Shigella flexneri S6162 S6162_16, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 44-2182 bp Neighborhood of RT #1 [44, 2202] RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 44-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-839 bp Feature: gene Location: 857-1078 bp Feature: domain Description: Tra5 Location: 869-1061 bp Feature: domain Description: Tra5 Location: 869-1 061 bp Feature: gene Location: 1453-2202 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1528-2182 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1 528-21 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), RVT-GII, Tra5 (COG2801)

Seq: ANAN01000469.1 Shigella flexneri S6162 S6162_521, whole genome shotgun sequence (720 bp)
Overview 1 RT 1: 2-719 bp Neighborhood of RT #1 [2, 718] RVT-GII GIIM Feature: gene Location: 2-718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-542 bp Feature: domain Description: GIIM Note: maturase Location: 596-719 bp Feature: domain Description: GIIM Note: maturase Location: 596-719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ANAN01000470.1 Shigella flexneri S6162 S6162_522, whole genome shotgun sequence (279 bp)
Overview 1 RT 1: 3-279 bp Neighborhood of RT #1 [3, 278] RVT_N RVT-GII Feature: gene Location: 3-278 bp Feature: RT Description: RVT_N Location: 6-111 bp Feature: RT Description: RVT_N Location: 6-111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: ANAN01000644.1 Shigella flexneri S6162 S6162_68, whole genome shotgun sequence (20707 bp)
Overview 1 RT 1: 12865-15519 bp Neighborhood of RT #1 [12865, 15519] COG3547 RVT-GII GIIM Feature: gene Location: 12865-13350 bp Feature: domain Description: COG3547 Location: 12883-13336 bp Feature: domain Description: COG354 7 Location: 12883-13336 bp Feature: gene Location: 13446-13613 bp Feature: gene Location: 13639-14856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13825-14479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13825-14 4 79 bp Feature: domain Description: GIIM Note: maturase Location: 14557-14779 bp Feature: domain Description: GIIM Note: maturase Location: 14 557-14 779 bp Feature: gene Location: 14867-15286 bp Feature: gene Location: 15325-15519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)