myRT

myRT report for GCA_000817735.3_ASM81773v3

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Seq: JTJC03000008.1 (224735 bp)
Overview 1 RT 1: 79407-84488 bp Neighborhood of RT #1 [79407, 84514] TRX_NTR RVT_N RVT-GII GIIM HNHc KOG0910 DsbD Feature: gene Location: 79407-80879 bp Feature: gene Location: 80876-81190 bp Feature: domain Description: TRX_NTR Location: 81026-81173 bp Feature: domain Description: TRX_NTR Location: 81 026-81 1 73 bp Feature: gene Location: 81661-83391 bp Feature: RT Description: RVT_N Location: 81715-81961 bp Feature: RT Description: RVT_N Location: 81 71 5-81 961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82009-82690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82009-82690 bp Feature: domain Description: GIIM Note: maturase Location: 82753-82975 bp Feature: domain Description: GIIM Note: maturase Location: 82753-82975 bp Feature: domain Description: HNHc Note: nucleases Location: 83200-83359 bp Feature: domain Description: HNHc Note: nucleases Location: 83200-83359 bp Feature: gene Location: 83457-83648 bp Feature: domain Description: KOG0910 Location: 83502-83643 bp Feature: domain Description: KOG091 0 Location: 83502-83643 bp Feature: gene Location: 83669-84514 bp Feature: domain Description: DsbD Location: 83903-84488 bp Feature: domain Description: DsbD Location: 83903-84488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), KOG0910 (KOG0910, Thioredoxin-like protein ), DsbD (pfam02683)

Seq: JTJC03000001.1 (1697822 bp)
Overview 1 RT 1: 404663-408738 bp Neighborhood of RT #1 [404663, 408785] ParE RVT-Retrons SPFH_eoslipins_u2 SPFH_eoslipins_u2 SPFH_eoslipins_u2 Feature: gene Location: 404663-404956 bp Feature: gene Location: 404953-405243 bp Feature: domain Description: ParE Location: 404965-405238 bp Feature: domain Description: ParE Location: 404965-4052 38 bp Feature: gene Location: 405337-406383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 405535-406141 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 405535-406141 bp Feature: gene Location: 406840-406995 bp Feature: gene Location: 407259-408785 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 407280-407430 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 4072 80-407430 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 407679-407787 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 407679-407787 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 408099-408738 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 408099-408738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), RVT-Retrons, SPFH_eoslipins_u2 (cd13438)

Seq: JTJC03000003.1 (688370 bp)
Overview 1 RT 1: 1039-12247 bp Neighborhood of RT #1 [1039, 12247] PAS_4 GAF_2 TMAO_torS TMAO_torS PAS_4 TMAO_torS TMAO_torS BaeS TMAO_torS PAS_3 BaeS PRK11107 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1039-5061 bp Feature: domain Description: PAS_4 Location: 1261-1543 bp Feature: domain Description: PAS_4 Location: 1261-1543 bp Feature: domain Description: GAF_2 Location: 1615-2047 bp Feature: domain Description: GAF_2 Location: 1615-2047 bp Feature: domain Description: TMAO_torS Location: 2074-2794 bp Feature: domain Description: TMAO_torS Location: 2074-2794 bp Feature: domain Description: TMAO_torS Location: 2968-3355 bp Feature: domain Description: TMAO_torS Location: 2968-3 3 55 bp Feature: domain Description: PAS_4 Location: 3460-3724 bp Feature: domain Description: PAS_4 Location: 3 460-3 724 bp Feature: domain Description: TMAO_torS Location: 3766-4108 bp Feature: domain Description: TMAO_torS Location: 3 766-4108 bp Feature: domain Description: TMAO_torS Location: 4237-5029 bp Feature: domain Description: TMAO_torS Location: 423 7-5029 bp Feature: gene Location: 5051-8995 bp Feature: domain Description: BaeS Location: 5987-6758 bp Feature: domain Description: BaeS Location: 5987-6758 bp Feature: domain Description: TMAO_torS Location: 6962-7340 bp Feature: domain Description: TMAO_torS Location: 6962-73 40 bp Feature: domain Description: PAS_3 Location: 7427-7694 bp Feature: domain Description: PAS_3 Location: 7427-7694 bp Feature: domain Description: BaeS Location: 7709-8531 bp Feature: domain Description: BaeS Location: 7709-853 1 bp Feature: domain Description: PRK11107 Location: 8594-8978 bp Feature: domain Description: PRK11107 Location: 8594-8978 bp Feature: gene Location: 9166-10896 bp Feature: RT Description: RVT_N Location: 9220-9466 bp Feature: RT Description: RVT_N Location: 9220-9466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9514-10195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9514-10195 bp Feature: domain Description: GIIM Note: maturase Location: 10258-10480 bp Feature: domain Description: GIIM Note: maturase Location: 10258-10480 bp Feature: domain Description: HNHc Note: nucleases Location: 10705-10864 bp Feature: domain Description: HNHc Note: nucleases Location: 10705-10864 bp Feature: gene Location: 11367-11561 bp Feature: gene Location: 11996-12247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), TMAO_torS (TIGR02956), PAS_3 (pfam08447), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)