myRT

myRT report for GCA_000817785.2_ASM81778v2

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Seq: JTCM02000190.1 (5939 bp)
Overview 1 RT 1: 513-4975 bp Neighborhood of RT #1 [513, 5103] NHLM_micro_ABC2 RVT_N RVT-GII Intron_maturas2 Feature: gene Location: 513-761 bp Feature: domain Description: NHLM_micro_ABC2 Location: 516-708 bp Feature: domain Description: NHLM_micro_ABC2 Location: 51 6-708 bp Feature: gene Location: 1356-1899 bp Feature: gene Location: 2503-3075 bp Feature: RT Description: RVT_N Location: 2542-2785 bp Feature: RT Description: RVT_N Location: 2542-2785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830-3061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830-3061 bp Feature: gene Location: 3572-4431 bp Feature: gene Location: 4555-5103 bp Feature: domain Description: Intron_maturas2 Location: 4735-4975 bp Feature: domain Description: Intron_maturas2 Location: 4735-4975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), NHLM_micro_ABC2 (TIGR03797)

Seq: JTCM02000014.1 (97519 bp)
Overview 1 RT 1: 59861-67271 bp Neighborhood of RT #1 [59861, 67300] MhpC RVT-Retrons FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP VCBS VCBS VCBS VCBS Feature: gene Location: 59861-61495 bp Feature: gene Location: 61904-62713 bp Feature: domain Description: MhpC Location: 61964-62708 bp Feature: domain Description: MhpC Location: 61964-62 708 bp Feature: gene Location: 63218-64630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63767-64382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63767-64382 bp Feature: gene Location: 64638-65813 bp Feature: domain Description: FG-GAP Location: 64818-64848 bp Feature: domain Description: FG-GAP Location: 64818-64848 bp Feature: domain Description: FG-GAP Location: 64965-65037 bp Feature: domain Description: FG-GAP Location: 64965-65037 bp Feature: domain Description: FG-GAP Location: 65094-65181 bp Feature: domain Description: FG-GAP Location: 65094-65181 bp Feature: domain Description: FG-GAP Location: 65238-65325 bp Feature: domain Description: FG-GAP Location: 652 38-6532 5 bp Feature: domain Description: FG-GAP Location: 65391-65463 bp Feature: domain Description: FG-GAP Location: 65391-65463 bp Feature: domain Description: FG-GAP Location: 65517-65607 bp Feature: domain Description: FG-GAP Location: 65517-65607 bp Feature: domain Description: FG-GAP Location: 65661-65748 bp Feature: domain Description: FG-GAP Location: 65661-65748 bp Feature: gene Location: 66107-67300 bp Feature: domain Description: VCBS Location: 66305-66482 bp Feature: domain Description: VCBS Location: 66305-66482 bp Feature: domain Description: VCBS Location: 66596-66770 bp Feature: domain Description: VCBS Location: 66596-66770 bp Feature: domain Description: VCBS Location: 66881-67055 bp Feature: domain Description: VCBS Location: 66881-67055 bp Feature: domain Description: VCBS Location: 67166-67271 bp Feature: domain Description: VCBS Location: 67166-672 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-Retrons, FG-GAP (pfam01839), VCBS (pfam13517)

Seq: JTCM02000050.1 (47400 bp)
Overview 1 RT 1: 863-4185 bp Neighborhood of RT #1 [863, 4185] YprA Helicase_C RVT-GII RVT-GII Feature: gene Location: 863-1393 bp Feature: domain Description: YprA Location: 881-1319 bp Feature: domain Description: YprA Location: 881-13 19 bp Feature: gene Location: 1549-1938 bp Feature: domain Description: Helicase_C Location: 1648-1810 bp Feature: domain Description: Helicase_C Location: 1648-1810 bp Feature: gene Location: 3163-3504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3178-3298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 178-3 298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3298-3466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 298-3 466 bp Feature: gene Location: 3497-3757 bp Feature: gene Location: 3997-4185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Helicase_C (pfam00271), RVT-GII, YprA (COG1205)