myRT

myRT report for GCA_000817855.1_ASM81785v1

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Seq: JXBF01000035.1 (17090 bp)
Overview 1 RT 1: 8953-13395 bp Neighborhood of RT #1 [8953, 13397] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 8953-10224 bp Feature: domain Description: umuC Location: 8956-10216 bp Feature: domain Description: umuC Location: 8956-1 021 6 bp Feature: gene Location: 10224-10907 bp Feature: domain Description: PRK10276 Location: 10527-10890 bp Feature: domain Description: PRK1 0276 Location: 1 0527-1 0890 bp Feature: gene Location: 11061-12548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11466-12156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 466-1 21 56 bp Feature: gene Location: 12700-12975 bp Feature: domain Description: InsA Location: 12703-12970 bp Feature: domain Description: InsA Location: 1 2703-1 2970 bp Feature: gene Location: 12894-13397 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13005-13395 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 3005-1 3395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: JXBF01000004.1 (487756 bp)
Overview 1 RT 1: 219498-224381 bp Neighborhood of RT #1 [219498, 224383] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 219498-220763 bp Feature: domain Description: umuC Location: 219501-220761 bp Feature: domain Description: umuC Location: 2 19501-2 2 0761 bp Feature: gene Location: 220988-221176 bp Feature: gene Location: 221436-222344 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221709-222165 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 2 1709-2 2 2 165 bp Feature: gene Location: 222545-223213 bp Feature: domain Description: PRK09951 Location: 222548-223211 bp Feature: domain Description: PRK09951 Location: 2 2 2 548-2 2 32 11 bp Feature: gene Location: 223418-224383 bp Feature: domain Description: PRK15110 Location: 223421-224381 bp Feature: domain Description: PRK15110 Location: 2 2 342 1-2 2 4381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: JXBF01000010.1 (3976 bp)
Overview 1 RT 1: 627-2650 bp Neighborhood of RT #1 [627, 2650] RVT-Retrons CspC Feature: gene Location: 627-809 bp Feature: gene Location: 831-1970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 975-1530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 975-153 0 bp Feature: gene Location: 1975-2178 bp Feature: domain Description: CspC Location: 1978-2173 bp Feature: domain Description: CspC Location: 1978-2173 bp Feature: gene Location: 2387-2650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)